Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Pcdhac2Q91Y09 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhac2Q91Y09 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pcdhac2Q91Y09 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.71■■■□□ 2.03
Pcdhac2Q91Y09 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhac2Q91Y09 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhac2Q91Y09 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.66■■■□□ 2.02
Pcdhac2Q91Y09 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Pcdhac2Q91Y09 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhac2Q91Y09 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdhac2Q91Y09 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.63■■■□□ 2.01
Pcdhac2Q91Y09 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.63■■■□□ 2.01
Pcdhac2Q91Y09 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdhac2Q91Y09 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdhac2Q91Y09 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhac2Q91Y09 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.62■■■□□ 2.01
Pcdhac2Q91Y09 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.62■■■□□ 2.01
Pcdhac2Q91Y09 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.62■■■□□ 2.01
Pcdhac2Q91Y09 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.61■■■□□ 2.01
Pcdhac2Q91Y09 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhac2Q91Y09 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhac2Q91Y09 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhac2Q91Y09 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhac2Q91Y09 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhac2Q91Y09 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhac2Q91Y09 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhac2Q91Y09 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Pcdhac2Q91Y09 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pcdhac2Q91Y09 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdhac2Q91Y09 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhac2Q91Y09 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhac2Q91Y09 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhac2Q91Y09 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.53■■■□□ 2
Pcdhac2Q91Y09 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhac2Q91Y09 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhac2Q91Y09 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Pcdhac2Q91Y09 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdhac2Q91Y09 Nkain2-201ENSMUST00000092602 558 ntBASIC27.51■■□□□ 1.99
Pcdhac2Q91Y09 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhac2Q91Y09 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhac2Q91Y09 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.48■■□□□ 1.99
Pcdhac2Q91Y09 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhac2Q91Y09 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhac2Q91Y09 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhac2Q91Y09 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhac2Q91Y09 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhac2Q91Y09 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhac2Q91Y09 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhac2Q91Y09 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhac2Q91Y09 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.41■■□□□ 1.98
Pcdhac2Q91Y09 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhac2Q91Y09 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhac2Q91Y09 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhac2Q91Y09 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.4■■□□□ 1.98
Pcdhac2Q91Y09 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhac2Q91Y09 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Pcdhac2Q91Y09 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Pcdhac2Q91Y09 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
Pcdhac2Q91Y09 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhac2Q91Y09 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhac2Q91Y09 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.37■■□□□ 1.97
Pcdhac2Q91Y09 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhac2Q91Y09 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhac2Q91Y09 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhac2Q91Y09 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
Pcdhac2Q91Y09 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.35■■□□□ 1.97
Pcdhac2Q91Y09 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhac2Q91Y09 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhac2Q91Y09 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhac2Q91Y09 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.31■■□□□ 1.96
Pcdhac2Q91Y09 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhac2Q91Y09 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhac2Q91Y09 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhac2Q91Y09 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhac2Q91Y09 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhac2Q91Y09 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdhac2Q91Y09 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
Pcdhac2Q91Y09 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhac2Q91Y09 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhac2Q91Y09 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhac2Q91Y09 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.21■■□□□ 1.95
Pcdhac2Q91Y09 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhac2Q91Y09 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdhac2Q91Y09 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.2■■□□□ 1.94
Pcdhac2Q91Y09 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.19■■□□□ 1.94
Pcdhac2Q91Y09 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhac2Q91Y09 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhac2Q91Y09 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Pcdhac2Q91Y09 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Pcdhac2Q91Y09 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.17■■□□□ 1.94
Pcdhac2Q91Y09 Gm7432-201ENSMUST00000210343 879 ntBASIC27.16■■□□□ 1.94
Pcdhac2Q91Y09 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhac2Q91Y09 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.15■■□□□ 1.94
Pcdhac2Q91Y09 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhac2Q91Y09 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhac2Q91Y09 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhac2Q91Y09 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.12■■□□□ 1.93
Pcdhac2Q91Y09 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Pcdhac2Q91Y09 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhac2Q91Y09 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.1■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms