Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Pcdhb5Q91XZ5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pcdhb5Q91XZ5 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.95■■■□□ 2.39
Pcdhb5Q91XZ5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Pcdhb5Q91XZ5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Pcdhb5Q91XZ5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pcdhb5Q91XZ5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pcdhb5Q91XZ5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pcdhb5Q91XZ5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.91■■■□□ 2.38
Pcdhb5Q91XZ5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pcdhb5Q91XZ5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pcdhb5Q91XZ5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Pcdhb5Q91XZ5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Pcdhb5Q91XZ5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.89■■■□□ 2.37
Pcdhb5Q91XZ5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Pcdhb5Q91XZ5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Pcdhb5Q91XZ5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Pcdhb5Q91XZ5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.84■■■□□ 2.37
Pcdhb5Q91XZ5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
Pcdhb5Q91XZ5 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.83■■■□□ 2.37
Pcdhb5Q91XZ5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Pcdhb5Q91XZ5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.82■■■□□ 2.37
Pcdhb5Q91XZ5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Pcdhb5Q91XZ5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pcdhb5Q91XZ5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Pcdhb5Q91XZ5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Pcdhb5Q91XZ5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pcdhb5Q91XZ5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pcdhb5Q91XZ5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Pcdhb5Q91XZ5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pcdhb5Q91XZ5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Pcdhb5Q91XZ5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.75■■■□□ 2.35
Pcdhb5Q91XZ5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pcdhb5Q91XZ5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.73■■■□□ 2.35
Pcdhb5Q91XZ5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Pcdhb5Q91XZ5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Pcdhb5Q91XZ5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdhb5Q91XZ5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.71■■■□□ 2.35
Pcdhb5Q91XZ5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdhb5Q91XZ5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
Pcdhb5Q91XZ5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pcdhb5Q91XZ5 Nkain2-201ENSMUST00000092602 558 ntBASIC29.7■■■□□ 2.35
Pcdhb5Q91XZ5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdhb5Q91XZ5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdhb5Q91XZ5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdhb5Q91XZ5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
Pcdhb5Q91XZ5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pcdhb5Q91XZ5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Pcdhb5Q91XZ5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pcdhb5Q91XZ5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pcdhb5Q91XZ5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pcdhb5Q91XZ5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pcdhb5Q91XZ5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pcdhb5Q91XZ5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdhb5Q91XZ5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdhb5Q91XZ5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pcdhb5Q91XZ5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pcdhb5Q91XZ5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.6■■■□□ 2.33
Pcdhb5Q91XZ5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pcdhb5Q91XZ5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
Pcdhb5Q91XZ5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.58■■■□□ 2.33
Pcdhb5Q91XZ5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pcdhb5Q91XZ5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pcdhb5Q91XZ5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pcdhb5Q91XZ5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdhb5Q91XZ5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.54■■■□□ 2.32
Pcdhb5Q91XZ5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdhb5Q91XZ5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Pcdhb5Q91XZ5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.51■■■□□ 2.31
Pcdhb5Q91XZ5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.51■■■□□ 2.31
Pcdhb5Q91XZ5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdhb5Q91XZ5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdhb5Q91XZ5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.49■■■□□ 2.31
Pcdhb5Q91XZ5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.49■■■□□ 2.31
Pcdhb5Q91XZ5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.48■■■□□ 2.31
Pcdhb5Q91XZ5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Pcdhb5Q91XZ5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Pcdhb5Q91XZ5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pcdhb5Q91XZ5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Pcdhb5Q91XZ5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb5Q91XZ5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Pcdhb5Q91XZ5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb5Q91XZ5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb5Q91XZ5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdhb5Q91XZ5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdhb5Q91XZ5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdhb5Q91XZ5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Pcdhb5Q91XZ5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.37■■■□□ 2.29
Pcdhb5Q91XZ5 Gm7432-201ENSMUST00000210343 879 ntBASIC29.37■■■□□ 2.29
Pcdhb5Q91XZ5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Pcdhb5Q91XZ5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.36■■■□□ 2.29
Pcdhb5Q91XZ5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.34■■■□□ 2.29
Pcdhb5Q91XZ5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhb5Q91XZ5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhb5Q91XZ5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhb5Q91XZ5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Pcdhb5Q91XZ5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Pcdhb5Q91XZ5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.33■■■□□ 2.29
Pcdhb5Q91XZ5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhb5Q91XZ5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms