Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
HnrnpuQ8VEK3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.95■■■□□ 2.55
HnrnpuQ8VEK3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
HnrnpuQ8VEK3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HnrnpuQ8VEK3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
HnrnpuQ8VEK3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
HnrnpuQ8VEK3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HnrnpuQ8VEK3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HnrnpuQ8VEK3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
HnrnpuQ8VEK3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
HnrnpuQ8VEK3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.9■■■□□ 2.54
HnrnpuQ8VEK3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
HnrnpuQ8VEK3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.89■■■□□ 2.53
HnrnpuQ8VEK3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
HnrnpuQ8VEK3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
HnrnpuQ8VEK3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.88■■■□□ 2.53
HnrnpuQ8VEK3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HnrnpuQ8VEK3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.87■■■□□ 2.53
HnrnpuQ8VEK3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HnrnpuQ8VEK3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HnrnpuQ8VEK3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
HnrnpuQ8VEK3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HnrnpuQ8VEK3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HnrnpuQ8VEK3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HnrnpuQ8VEK3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
HnrnpuQ8VEK3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.83■■■□□ 2.53
HnrnpuQ8VEK3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.83■■■□□ 2.53
HnrnpuQ8VEK3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HnrnpuQ8VEK3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HnrnpuQ8VEK3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HnrnpuQ8VEK3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
HnrnpuQ8VEK3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
HnrnpuQ8VEK3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HnrnpuQ8VEK3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HnrnpuQ8VEK3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.75■■■□□ 2.51
HnrnpuQ8VEK3 Zfp131-205ENSMUST00000223812 663 ntBASIC30.74■■■□□ 2.51
HnrnpuQ8VEK3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HnrnpuQ8VEK3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
HnrnpuQ8VEK3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.73■■■□□ 2.51
HnrnpuQ8VEK3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.73■■■□□ 2.51
HnrnpuQ8VEK3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
HnrnpuQ8VEK3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
HnrnpuQ8VEK3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
HnrnpuQ8VEK3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
HnrnpuQ8VEK3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.69■■■□□ 2.5
HnrnpuQ8VEK3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HnrnpuQ8VEK3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HnrnpuQ8VEK3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HnrnpuQ8VEK3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HnrnpuQ8VEK3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HnrnpuQ8VEK3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HnrnpuQ8VEK3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HnrnpuQ8VEK3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HnrnpuQ8VEK3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
HnrnpuQ8VEK3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.63■■■□□ 2.49
HnrnpuQ8VEK3 Amer2-203ENSMUST00000225247 2662 ntBASIC30.61■■■□□ 2.49
HnrnpuQ8VEK3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.61■■■□□ 2.49
HnrnpuQ8VEK3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HnrnpuQ8VEK3 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.59■■■□□ 2.49
HnrnpuQ8VEK3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HnrnpuQ8VEK3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HnrnpuQ8VEK3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.57■■■□□ 2.48
HnrnpuQ8VEK3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
HnrnpuQ8VEK3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HnrnpuQ8VEK3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
HnrnpuQ8VEK3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HnrnpuQ8VEK3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.56■■■□□ 2.48
HnrnpuQ8VEK3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
HnrnpuQ8VEK3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
HnrnpuQ8VEK3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.54■■■□□ 2.48
HnrnpuQ8VEK3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.54■■■□□ 2.48
HnrnpuQ8VEK3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
HnrnpuQ8VEK3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
HnrnpuQ8VEK3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.47
HnrnpuQ8VEK3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
HnrnpuQ8VEK3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
HnrnpuQ8VEK3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
HnrnpuQ8VEK3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
HnrnpuQ8VEK3 Gm9397-201ENSMUST00000200125 605 ntBASIC30.49■■■□□ 2.47
HnrnpuQ8VEK3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HnrnpuQ8VEK3 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.48■■■□□ 2.47
HnrnpuQ8VEK3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
HnrnpuQ8VEK3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
HnrnpuQ8VEK3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.46■■■□□ 2.47
HnrnpuQ8VEK3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
HnrnpuQ8VEK3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
HnrnpuQ8VEK3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
HnrnpuQ8VEK3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
HnrnpuQ8VEK3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.44■■■□□ 2.46
HnrnpuQ8VEK3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
HnrnpuQ8VEK3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
HnrnpuQ8VEK3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
HnrnpuQ8VEK3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
HnrnpuQ8VEK3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.41■■■□□ 2.46
HnrnpuQ8VEK3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms