Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rfc3Q8R323 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rfc3Q8R323 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rfc3Q8R323 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rfc3Q8R323 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rfc3Q8R323 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.71■■□□□ 1.23
Rfc3Q8R323 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rfc3Q8R323 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rfc3Q8R323 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Rfc3Q8R323 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.7■■□□□ 1.22
Rfc3Q8R323 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rfc3Q8R323 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Rfc3Q8R323 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rfc3Q8R323 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc3Q8R323 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rfc3Q8R323 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.67■■□□□ 1.22
Rfc3Q8R323 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.64■■□□□ 1.21
Rfc3Q8R323 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfc3Q8R323 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfc3Q8R323 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfc3Q8R323 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rfc3Q8R323 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.63■■□□□ 1.21
Rfc3Q8R323 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc3Q8R323 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc3Q8R323 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rfc3Q8R323 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rfc3Q8R323 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.61■■□□□ 1.21
Rfc3Q8R323 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc3Q8R323 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rfc3Q8R323 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rfc3Q8R323 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Rfc3Q8R323 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Rfc3Q8R323 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc3Q8R323 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc3Q8R323 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.57■■□□□ 1.2
Rfc3Q8R323 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rfc3Q8R323 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rfc3Q8R323 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rfc3Q8R323 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
Rfc3Q8R323 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc3Q8R323 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rfc3Q8R323 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rfc3Q8R323 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.53■■□□□ 1.2
Rfc3Q8R323 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.52■■□□□ 1.2
Rfc3Q8R323 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc3Q8R323 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc3Q8R323 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc3Q8R323 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rfc3Q8R323 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rfc3Q8R323 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rfc3Q8R323 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc3Q8R323 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc3Q8R323 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rfc3Q8R323 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc3Q8R323 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rfc3Q8R323 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Rfc3Q8R323 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.47■■□□□ 1.19
Rfc3Q8R323 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rfc3Q8R323 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rfc3Q8R323 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc3Q8R323 Gm6821-201ENSMUST00000107540 542 ntBASIC22.45■■□□□ 1.18
Rfc3Q8R323 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc3Q8R323 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rfc3Q8R323 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc3Q8R323 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc3Q8R323 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.44■■□□□ 1.18
Rfc3Q8R323 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc3Q8R323 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rfc3Q8R323 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rfc3Q8R323 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc3Q8R323 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc3Q8R323 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rfc3Q8R323 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Rfc3Q8R323 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc3Q8R323 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc3Q8R323 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rfc3Q8R323 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.41■■□□□ 1.18
Rfc3Q8R323 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rfc3Q8R323 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc3Q8R323 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rfc3Q8R323 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.39■■□□□ 1.17
Rfc3Q8R323 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc3Q8R323 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc3Q8R323 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc3Q8R323 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc3Q8R323 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rfc3Q8R323 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc3Q8R323 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rfc3Q8R323 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc3Q8R323 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rfc3Q8R323 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Rfc3Q8R323 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rfc3Q8R323 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc3Q8R323 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rfc3Q8R323 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc3Q8R323 Gm8503-201ENSMUST00000118131 455 ntBASIC22.34■■□□□ 1.17
Rfc3Q8R323 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc3Q8R323 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rfc3Q8R323 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rfc3Q8R323 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms