Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cgref1Q8R1U2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Cgref1Q8R1U2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Cgref1Q8R1U2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cgref1Q8R1U2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Cgref1Q8R1U2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
Cgref1Q8R1U2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cgref1Q8R1U2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cgref1Q8R1U2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cgref1Q8R1U2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Cgref1Q8R1U2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cgref1Q8R1U2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Cgref1Q8R1U2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Cgref1Q8R1U2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cgref1Q8R1U2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Cgref1Q8R1U2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cgref1Q8R1U2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cgref1Q8R1U2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cgref1Q8R1U2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Cgref1Q8R1U2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cgref1Q8R1U2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cgref1Q8R1U2 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.78■■□□□ 1.56
Cgref1Q8R1U2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cgref1Q8R1U2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cgref1Q8R1U2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cgref1Q8R1U2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cgref1Q8R1U2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cgref1Q8R1U2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cgref1Q8R1U2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cgref1Q8R1U2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cgref1Q8R1U2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cgref1Q8R1U2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Cgref1Q8R1U2 Gm25262-201ENSMUST00000174934 133 ntBASIC24.73■■□□□ 1.55
Cgref1Q8R1U2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cgref1Q8R1U2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.71■■□□□ 1.55
Cgref1Q8R1U2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cgref1Q8R1U2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.7■■□□□ 1.54
Cgref1Q8R1U2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cgref1Q8R1U2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cgref1Q8R1U2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cgref1Q8R1U2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Cgref1Q8R1U2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cgref1Q8R1U2 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.68■■□□□ 1.54
Cgref1Q8R1U2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cgref1Q8R1U2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
Cgref1Q8R1U2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgref1Q8R1U2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgref1Q8R1U2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.65■■□□□ 1.54
Cgref1Q8R1U2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cgref1Q8R1U2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cgref1Q8R1U2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Cgref1Q8R1U2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cgref1Q8R1U2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
Cgref1Q8R1U2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cgref1Q8R1U2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cgref1Q8R1U2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cgref1Q8R1U2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cgref1Q8R1U2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cgref1Q8R1U2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cgref1Q8R1U2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Cgref1Q8R1U2 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.58■■□□□ 1.53
Cgref1Q8R1U2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cgref1Q8R1U2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cgref1Q8R1U2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.57■■□□□ 1.52
Cgref1Q8R1U2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cgref1Q8R1U2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cgref1Q8R1U2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cgref1Q8R1U2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cgref1Q8R1U2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cgref1Q8R1U2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Cgref1Q8R1U2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cgref1Q8R1U2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cgref1Q8R1U2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cgref1Q8R1U2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Cgref1Q8R1U2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
Cgref1Q8R1U2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cgref1Q8R1U2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Cgref1Q8R1U2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cgref1Q8R1U2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Cgref1Q8R1U2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cgref1Q8R1U2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cgref1Q8R1U2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.47■■□□□ 1.51
Cgref1Q8R1U2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cgref1Q8R1U2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.46■■□□□ 1.51
Cgref1Q8R1U2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cgref1Q8R1U2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.46■■□□□ 1.51
Cgref1Q8R1U2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
Cgref1Q8R1U2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.51
Cgref1Q8R1U2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cgref1Q8R1U2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms