Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trpm6Q8CIR4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.59■■□□□ 1.69
Trpm6Q8CIR4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Trpm6Q8CIR4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Trpm6Q8CIR4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.58■■□□□ 1.68
Trpm6Q8CIR4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trpm6Q8CIR4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.56■■□□□ 1.68
Trpm6Q8CIR4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trpm6Q8CIR4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trpm6Q8CIR4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trpm6Q8CIR4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trpm6Q8CIR4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trpm6Q8CIR4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Trpm6Q8CIR4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.53■■□□□ 1.68
Trpm6Q8CIR4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trpm6Q8CIR4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trpm6Q8CIR4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trpm6Q8CIR4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trpm6Q8CIR4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trpm6Q8CIR4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trpm6Q8CIR4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Trpm6Q8CIR4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trpm6Q8CIR4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trpm6Q8CIR4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trpm6Q8CIR4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Trpm6Q8CIR4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Trpm6Q8CIR4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trpm6Q8CIR4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Trpm6Q8CIR4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trpm6Q8CIR4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trpm6Q8CIR4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Trpm6Q8CIR4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trpm6Q8CIR4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.41■■□□□ 1.66
Trpm6Q8CIR4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trpm6Q8CIR4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trpm6Q8CIR4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trpm6Q8CIR4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trpm6Q8CIR4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trpm6Q8CIR4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trpm6Q8CIR4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trpm6Q8CIR4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.36■■□□□ 1.65
Trpm6Q8CIR4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trpm6Q8CIR4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
Trpm6Q8CIR4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trpm6Q8CIR4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trpm6Q8CIR4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trpm6Q8CIR4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trpm6Q8CIR4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trpm6Q8CIR4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trpm6Q8CIR4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trpm6Q8CIR4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trpm6Q8CIR4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trpm6Q8CIR4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trpm6Q8CIR4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.27■■□□□ 1.64
Trpm6Q8CIR4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.27■■□□□ 1.64
Trpm6Q8CIR4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trpm6Q8CIR4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trpm6Q8CIR4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.24■■□□□ 1.63
Trpm6Q8CIR4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trpm6Q8CIR4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.24■■□□□ 1.63
Trpm6Q8CIR4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trpm6Q8CIR4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trpm6Q8CIR4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.23■■□□□ 1.63
Trpm6Q8CIR4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Trpm6Q8CIR4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trpm6Q8CIR4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.22■■□□□ 1.63
Trpm6Q8CIR4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trpm6Q8CIR4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trpm6Q8CIR4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trpm6Q8CIR4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.2■■□□□ 1.63
Trpm6Q8CIR4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Trpm6Q8CIR4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trpm6Q8CIR4 Nkain2-201ENSMUST00000092602 558 ntBASIC25.19■■□□□ 1.62
Trpm6Q8CIR4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Trpm6Q8CIR4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trpm6Q8CIR4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.17■■□□□ 1.62
Trpm6Q8CIR4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
Trpm6Q8CIR4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
Trpm6Q8CIR4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Trpm6Q8CIR4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trpm6Q8CIR4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Trpm6Q8CIR4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.14■■□□□ 1.62
Trpm6Q8CIR4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Trpm6Q8CIR4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.12■■□□□ 1.61
Trpm6Q8CIR4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trpm6Q8CIR4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Trpm6Q8CIR4 Gm7432-201ENSMUST00000210343 879 ntBASIC25.1■■□□□ 1.61
Trpm6Q8CIR4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trpm6Q8CIR4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Trpm6Q8CIR4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trpm6Q8CIR4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Trpm6Q8CIR4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Trpm6Q8CIR4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trpm6Q8CIR4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Trpm6Q8CIR4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Trpm6Q8CIR4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trpm6Q8CIR4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trpm6Q8CIR4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trpm6Q8CIR4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Trpm6Q8CIR4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms