Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hist1h2aaQ8CGP4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Hist1h2aaQ8CGP4 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.19■■□□□ 1.3
Hist1h2aaQ8CGP4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hist1h2aaQ8CGP4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hist1h2aaQ8CGP4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.19■■□□□ 1.3
Hist1h2aaQ8CGP4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.19■■□□□ 1.3
Hist1h2aaQ8CGP4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Hist1h2aaQ8CGP4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hist1h2aaQ8CGP4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.17■■□□□ 1.3
Hist1h2aaQ8CGP4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2aaQ8CGP4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2aaQ8CGP4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.16■■□□□ 1.3
Hist1h2aaQ8CGP4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2aaQ8CGP4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Hist1h2aaQ8CGP4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Hist1h2aaQ8CGP4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hist1h2aaQ8CGP4 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.13■■□□□ 1.29
Hist1h2aaQ8CGP4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hist1h2aaQ8CGP4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hist1h2aaQ8CGP4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hist1h2aaQ8CGP4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hist1h2aaQ8CGP4 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.09■■□□□ 1.29
Hist1h2aaQ8CGP4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.08■■□□□ 1.29
Hist1h2aaQ8CGP4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hist1h2aaQ8CGP4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Hist1h2aaQ8CGP4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hist1h2aaQ8CGP4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hist1h2aaQ8CGP4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.05■■□□□ 1.28
Hist1h2aaQ8CGP4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Hist1h2aaQ8CGP4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hist1h2aaQ8CGP4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hist1h2aaQ8CGP4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hist1h2aaQ8CGP4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hist1h2aaQ8CGP4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hist1h2aaQ8CGP4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.03■■□□□ 1.28
Hist1h2aaQ8CGP4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.02■■□□□ 1.28
Hist1h2aaQ8CGP4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hist1h2aaQ8CGP4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2aaQ8CGP4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23■■□□□ 1.27
Hist1h2aaQ8CGP4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2aaQ8CGP4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2aaQ8CGP4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2aaQ8CGP4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hist1h2aaQ8CGP4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.99■■□□□ 1.27
Hist1h2aaQ8CGP4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Hist1h2aaQ8CGP4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Hist1h2aaQ8CGP4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Hist1h2aaQ8CGP4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.96■■□□□ 1.27
Hist1h2aaQ8CGP4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.94■■□□□ 1.26
Hist1h2aaQ8CGP4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hist1h2aaQ8CGP4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Hist1h2aaQ8CGP4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Hist1h2aaQ8CGP4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Hist1h2aaQ8CGP4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hist1h2aaQ8CGP4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2aaQ8CGP4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2aaQ8CGP4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2aaQ8CGP4 Gm9397-201ENSMUST00000200125 605 ntBASIC22.91■■□□□ 1.26
Hist1h2aaQ8CGP4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hist1h2aaQ8CGP4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Hist1h2aaQ8CGP4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.89■■□□□ 1.25
Hist1h2aaQ8CGP4 Gm45855-201ENSMUST00000212546 880 ntBASIC22.89■■□□□ 1.25
Hist1h2aaQ8CGP4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.89■■□□□ 1.25
Hist1h2aaQ8CGP4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Hist1h2aaQ8CGP4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Hist1h2aaQ8CGP4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.87■■□□□ 1.25
Hist1h2aaQ8CGP4 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.87■■□□□ 1.25
Hist1h2aaQ8CGP4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Hist1h2aaQ8CGP4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Hist1h2aaQ8CGP4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Hist1h2aaQ8CGP4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Hist1h2aaQ8CGP4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hist1h2aaQ8CGP4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.84■■□□□ 1.25
Hist1h2aaQ8CGP4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hist1h2aaQ8CGP4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hist1h2aaQ8CGP4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Hist1h2aaQ8CGP4 Gm24970-201ENSMUST00000175582 82 ntBASIC22.82■■□□□ 1.24
Hist1h2aaQ8CGP4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Hist1h2aaQ8CGP4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Hist1h2aaQ8CGP4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Hist1h2aaQ8CGP4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Hist1h2aaQ8CGP4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.81■■□□□ 1.24
Hist1h2aaQ8CGP4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.8■■□□□ 1.24
Hist1h2aaQ8CGP4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2aaQ8CGP4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
Hist1h2aaQ8CGP4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2aaQ8CGP4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2aaQ8CGP4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2aaQ8CGP4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms