Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Rab43Q8CG50 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rab43Q8CG50 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Rab43Q8CG50 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.56■■□□□ 1.52
Rab43Q8CG50 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rab43Q8CG50 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.55■■□□□ 1.52
Rab43Q8CG50 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rab43Q8CG50 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rab43Q8CG50 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rab43Q8CG50 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.52■■□□□ 1.52
Rab43Q8CG50 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.52■■□□□ 1.52
Rab43Q8CG50 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rab43Q8CG50 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rab43Q8CG50 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rab43Q8CG50 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rab43Q8CG50 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rab43Q8CG50 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rab43Q8CG50 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.48■■□□□ 1.51
Rab43Q8CG50 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.47■■□□□ 1.51
Rab43Q8CG50 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.47■■□□□ 1.51
Rab43Q8CG50 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rab43Q8CG50 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rab43Q8CG50 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Rab43Q8CG50 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Rab43Q8CG50 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rab43Q8CG50 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Rab43Q8CG50 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.44■■□□□ 1.5
Rab43Q8CG50 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rab43Q8CG50 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rab43Q8CG50 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Rab43Q8CG50 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rab43Q8CG50 Nkain2-201ENSMUST00000092602 558 ntBASIC24.4■■□□□ 1.5
Rab43Q8CG50 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rab43Q8CG50 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rab43Q8CG50 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rab43Q8CG50 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rab43Q8CG50 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.37■■□□□ 1.49
Rab43Q8CG50 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rab43Q8CG50 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rab43Q8CG50 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Rab43Q8CG50 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rab43Q8CG50 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rab43Q8CG50 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rab43Q8CG50 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rab43Q8CG50 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rab43Q8CG50 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Rab43Q8CG50 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rab43Q8CG50 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rab43Q8CG50 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rab43Q8CG50 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rab43Q8CG50 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.31■■□□□ 1.48
Rab43Q8CG50 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rab43Q8CG50 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rab43Q8CG50 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rab43Q8CG50 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rab43Q8CG50 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
Rab43Q8CG50 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rab43Q8CG50 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rab43Q8CG50 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rab43Q8CG50 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rab43Q8CG50 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.25■■□□□ 1.47
Rab43Q8CG50 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rab43Q8CG50 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rab43Q8CG50 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.24■■□□□ 1.47
Rab43Q8CG50 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rab43Q8CG50 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rab43Q8CG50 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.23■■□□□ 1.47
Rab43Q8CG50 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.21■■□□□ 1.47
Rab43Q8CG50 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rab43Q8CG50 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rab43Q8CG50 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rab43Q8CG50 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rab43Q8CG50 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Rab43Q8CG50 Gm7432-201ENSMUST00000210343 879 ntBASIC24.18■■□□□ 1.46
Rab43Q8CG50 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rab43Q8CG50 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rab43Q8CG50 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rab43Q8CG50 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rab43Q8CG50 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.16■■□□□ 1.46
Rab43Q8CG50 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rab43Q8CG50 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rab43Q8CG50 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rab43Q8CG50 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.12■■□□□ 1.45
Rab43Q8CG50 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
Rab43Q8CG50 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rab43Q8CG50 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rab43Q8CG50 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rab43Q8CG50 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rab43Q8CG50 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.1■■□□□ 1.45
Rab43Q8CG50 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.1■■□□□ 1.45
Rab43Q8CG50 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rab43Q8CG50 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rab43Q8CG50 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rab43Q8CG50 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
Rab43Q8CG50 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rab43Q8CG50 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Rab43Q8CG50 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rab43Q8CG50 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Rab43Q8CG50 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.03■■□□□ 1.44
Rab43Q8CG50 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms