Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SynpoQ8CC35 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SynpoQ8CC35 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
SynpoQ8CC35 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.68■■□□□ 1.38
SynpoQ8CC35 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SynpoQ8CC35 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SynpoQ8CC35 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.68■■□□□ 1.38
SynpoQ8CC35 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SynpoQ8CC35 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SynpoQ8CC35 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SynpoQ8CC35 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SynpoQ8CC35 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.66■■□□□ 1.38
SynpoQ8CC35 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SynpoQ8CC35 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.64■■□□□ 1.37
SynpoQ8CC35 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SynpoQ8CC35 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SynpoQ8CC35 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SynpoQ8CC35 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SynpoQ8CC35 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SynpoQ8CC35 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SynpoQ8CC35 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.58■■□□□ 1.37
SynpoQ8CC35 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SynpoQ8CC35 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SynpoQ8CC35 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SynpoQ8CC35 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SynpoQ8CC35 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
SynpoQ8CC35 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SynpoQ8CC35 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SynpoQ8CC35 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SynpoQ8CC35 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SynpoQ8CC35 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SynpoQ8CC35 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SynpoQ8CC35 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.51■■□□□ 1.35
SynpoQ8CC35 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.51■■□□□ 1.35
SynpoQ8CC35 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SynpoQ8CC35 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SynpoQ8CC35 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.5■■□□□ 1.35
SynpoQ8CC35 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SynpoQ8CC35 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SynpoQ8CC35 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.49■■□□□ 1.35
SynpoQ8CC35 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SynpoQ8CC35 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SynpoQ8CC35 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SynpoQ8CC35 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SynpoQ8CC35 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SynpoQ8CC35 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
SynpoQ8CC35 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SynpoQ8CC35 Amer2-203ENSMUST00000225247 2662 ntBASIC23.45■■□□□ 1.34
SynpoQ8CC35 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.44■■□□□ 1.34
SynpoQ8CC35 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SynpoQ8CC35 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SynpoQ8CC35 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SynpoQ8CC35 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SynpoQ8CC35 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SynpoQ8CC35 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SynpoQ8CC35 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SynpoQ8CC35 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SynpoQ8CC35 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SynpoQ8CC35 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SynpoQ8CC35 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
SynpoQ8CC35 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.39■■□□□ 1.33
SynpoQ8CC35 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SynpoQ8CC35 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SynpoQ8CC35 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SynpoQ8CC35 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SynpoQ8CC35 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SynpoQ8CC35 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SynpoQ8CC35 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SynpoQ8CC35 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SynpoQ8CC35 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.34■■□□□ 1.33
SynpoQ8CC35 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SynpoQ8CC35 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SynpoQ8CC35 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SynpoQ8CC35 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.33■■□□□ 1.33
SynpoQ8CC35 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SynpoQ8CC35 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SynpoQ8CC35 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.32■■□□□ 1.32
SynpoQ8CC35 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SynpoQ8CC35 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SynpoQ8CC35 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SynpoQ8CC35 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynpoQ8CC35 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SynpoQ8CC35 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynpoQ8CC35 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynpoQ8CC35 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynpoQ8CC35 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SynpoQ8CC35 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SynpoQ8CC35 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SynpoQ8CC35 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SynpoQ8CC35 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.28■■□□□ 1.32
SynpoQ8CC35 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SynpoQ8CC35 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SynpoQ8CC35 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SynpoQ8CC35 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SynpoQ8CC35 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms