Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pabpc5Q8C7D3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.76■■□□□ 1.55
Pabpc5Q8C7D3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pabpc5Q8C7D3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.75■■□□□ 1.55
Pabpc5Q8C7D3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pabpc5Q8C7D3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pabpc5Q8C7D3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pabpc5Q8C7D3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pabpc5Q8C7D3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pabpc5Q8C7D3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pabpc5Q8C7D3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pabpc5Q8C7D3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pabpc5Q8C7D3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pabpc5Q8C7D3 Gm24970-201ENSMUST00000175582 82 ntBASIC24.71■■□□□ 1.55
Pabpc5Q8C7D3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pabpc5Q8C7D3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.7■■□□□ 1.54
Pabpc5Q8C7D3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.7■■□□□ 1.54
Pabpc5Q8C7D3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.7■■□□□ 1.54
Pabpc5Q8C7D3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pabpc5Q8C7D3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pabpc5Q8C7D3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Pabpc5Q8C7D3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.68■■□□□ 1.54
Pabpc5Q8C7D3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Pabpc5Q8C7D3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
Pabpc5Q8C7D3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pabpc5Q8C7D3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Pabpc5Q8C7D3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pabpc5Q8C7D3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.64■■□□□ 1.54
Pabpc5Q8C7D3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.62■■□□□ 1.53
Pabpc5Q8C7D3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pabpc5Q8C7D3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pabpc5Q8C7D3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.6■■□□□ 1.53
Pabpc5Q8C7D3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Pabpc5Q8C7D3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pabpc5Q8C7D3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pabpc5Q8C7D3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pabpc5Q8C7D3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pabpc5Q8C7D3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Pabpc5Q8C7D3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pabpc5Q8C7D3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pabpc5Q8C7D3 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pabpc5Q8C7D3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pabpc5Q8C7D3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pabpc5Q8C7D3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pabpc5Q8C7D3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.54■■□□□ 1.52
Pabpc5Q8C7D3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Pabpc5Q8C7D3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.52■■□□□ 1.52
Pabpc5Q8C7D3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pabpc5Q8C7D3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pabpc5Q8C7D3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pabpc5Q8C7D3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pabpc5Q8C7D3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pabpc5Q8C7D3 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.49■■□□□ 1.51
Pabpc5Q8C7D3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pabpc5Q8C7D3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Pabpc5Q8C7D3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.48■■□□□ 1.51
Pabpc5Q8C7D3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pabpc5Q8C7D3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pabpc5Q8C7D3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pabpc5Q8C7D3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.45■■□□□ 1.5
Pabpc5Q8C7D3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pabpc5Q8C7D3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Pabpc5Q8C7D3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pabpc5Q8C7D3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.43■■□□□ 1.5
Pabpc5Q8C7D3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pabpc5Q8C7D3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pabpc5Q8C7D3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.42■■□□□ 1.5
Pabpc5Q8C7D3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pabpc5Q8C7D3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pabpc5Q8C7D3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pabpc5Q8C7D3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pabpc5Q8C7D3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pabpc5Q8C7D3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pabpc5Q8C7D3 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.4■■□□□ 1.5
Pabpc5Q8C7D3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pabpc5Q8C7D3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pabpc5Q8C7D3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pabpc5Q8C7D3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pabpc5Q8C7D3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pabpc5Q8C7D3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.38■■□□□ 1.49
Pabpc5Q8C7D3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Pabpc5Q8C7D3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pabpc5Q8C7D3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.35■■□□□ 1.49
Pabpc5Q8C7D3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pabpc5Q8C7D3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pabpc5Q8C7D3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pabpc5Q8C7D3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pabpc5Q8C7D3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Pabpc5Q8C7D3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pabpc5Q8C7D3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pabpc5Q8C7D3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pabpc5Q8C7D3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.3■■□□□ 1.48
Pabpc5Q8C7D3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.3■■□□□ 1.48
Pabpc5Q8C7D3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pabpc5Q8C7D3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms