Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Fam78aQ8C552 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Fam78aQ8C552 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Fam78aQ8C552 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.04■■□□□ 1.92
Fam78aQ8C552 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Fam78aQ8C552 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Fam78aQ8C552 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Fam78aQ8C552 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.98■■□□□ 1.91
Fam78aQ8C552 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Fam78aQ8C552 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Fam78aQ8C552 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Fam78aQ8C552 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.96■■□□□ 1.91
Fam78aQ8C552 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Fam78aQ8C552 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Fam78aQ8C552 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
Fam78aQ8C552 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.95■■□□□ 1.9
Fam78aQ8C552 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Fam78aQ8C552 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Fam78aQ8C552 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.94■■□□□ 1.9
Fam78aQ8C552 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Fam78aQ8C552 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Fam78aQ8C552 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Fam78aQ8C552 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Fam78aQ8C552 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.91■■□□□ 1.9
Fam78aQ8C552 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Fam78aQ8C552 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Fam78aQ8C552 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Fam78aQ8C552 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Fam78aQ8C552 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fam78aQ8C552 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Fam78aQ8C552 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Fam78aQ8C552 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Fam78aQ8C552 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.84■■□□□ 1.89
Fam78aQ8C552 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Fam78aQ8C552 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Fam78aQ8C552 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.83■■□□□ 1.89
Fam78aQ8C552 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Fam78aQ8C552 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Fam78aQ8C552 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fam78aQ8C552 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fam78aQ8C552 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Fam78aQ8C552 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Fam78aQ8C552 Nkain2-201ENSMUST00000092602 558 ntBASIC26.81■■□□□ 1.88
Fam78aQ8C552 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Fam78aQ8C552 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Fam78aQ8C552 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
Fam78aQ8C552 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Fam78aQ8C552 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Fam78aQ8C552 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Fam78aQ8C552 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Fam78aQ8C552 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Fam78aQ8C552 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Fam78aQ8C552 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Fam78aQ8C552 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Fam78aQ8C552 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Fam78aQ8C552 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Fam78aQ8C552 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Fam78aQ8C552 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.73■■□□□ 1.87
Fam78aQ8C552 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Fam78aQ8C552 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Fam78aQ8C552 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Fam78aQ8C552 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.69■■□□□ 1.86
Fam78aQ8C552 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
Fam78aQ8C552 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam78aQ8C552 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Fam78aQ8C552 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Fam78aQ8C552 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.66■■□□□ 1.86
Fam78aQ8C552 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Fam78aQ8C552 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.64■■□□□ 1.86
Fam78aQ8C552 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.86
Fam78aQ8C552 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.63■■□□□ 1.85
Fam78aQ8C552 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Fam78aQ8C552 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Fam78aQ8C552 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Fam78aQ8C552 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.6■■□□□ 1.85
Fam78aQ8C552 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Fam78aQ8C552 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.59■■□□□ 1.85
Fam78aQ8C552 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Fam78aQ8C552 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Fam78aQ8C552 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Fam78aQ8C552 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Fam78aQ8C552 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Fam78aQ8C552 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Fam78aQ8C552 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
Fam78aQ8C552 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
Fam78aQ8C552 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Fam78aQ8C552 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Fam78aQ8C552 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Fam78aQ8C552 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.51■■□□□ 1.83
Fam78aQ8C552 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Fam78aQ8C552 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.5■■□□□ 1.83
Fam78aQ8C552 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Fam78aQ8C552 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Fam78aQ8C552 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Fam78aQ8C552 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.48■■□□□ 1.83
Fam78aQ8C552 Gm7432-201ENSMUST00000210343 879 ntBASIC26.48■■□□□ 1.83
Fam78aQ8C552 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
Fam78aQ8C552 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Fam78aQ8C552 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Fam78aQ8C552 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms