Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdk5rap1Q8BTW8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdk5rap1Q8BTW8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdk5rap1Q8BTW8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.77■■□□□ 1.4
Cdk5rap1Q8BTW8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdk5rap1Q8BTW8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdk5rap1Q8BTW8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdk5rap1Q8BTW8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdk5rap1Q8BTW8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdk5rap1Q8BTW8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdk5rap1Q8BTW8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cdk5rap1Q8BTW8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdk5rap1Q8BTW8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Cdk5rap1Q8BTW8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cdk5rap1Q8BTW8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdk5rap1Q8BTW8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdk5rap1Q8BTW8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdk5rap1Q8BTW8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdk5rap1Q8BTW8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdk5rap1Q8BTW8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cdk5rap1Q8BTW8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cdk5rap1Q8BTW8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cdk5rap1Q8BTW8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cdk5rap1Q8BTW8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
Cdk5rap1Q8BTW8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cdk5rap1Q8BTW8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cdk5rap1Q8BTW8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cdk5rap1Q8BTW8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cdk5rap1Q8BTW8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Cdk5rap1Q8BTW8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.63■■□□□ 1.37
Cdk5rap1Q8BTW8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdk5rap1Q8BTW8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cdk5rap1Q8BTW8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Cdk5rap1Q8BTW8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cdk5rap1Q8BTW8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cdk5rap1Q8BTW8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.62■■□□□ 1.37
Cdk5rap1Q8BTW8 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.61■■□□□ 1.37
Cdk5rap1Q8BTW8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdk5rap1Q8BTW8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Cdk5rap1Q8BTW8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cdk5rap1Q8BTW8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cdk5rap1Q8BTW8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Cdk5rap1Q8BTW8 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.57■■□□□ 1.36
Cdk5rap1Q8BTW8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cdk5rap1Q8BTW8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cdk5rap1Q8BTW8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdk5rap1Q8BTW8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdk5rap1Q8BTW8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cdk5rap1Q8BTW8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Cdk5rap1Q8BTW8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cdk5rap1Q8BTW8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cdk5rap1Q8BTW8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cdk5rap1Q8BTW8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.5■■□□□ 1.35
Cdk5rap1Q8BTW8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdk5rap1Q8BTW8 Gm6821-201ENSMUST00000107540 542 ntBASIC23.5■■□□□ 1.35
Cdk5rap1Q8BTW8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.5■■□□□ 1.35
Cdk5rap1Q8BTW8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cdk5rap1Q8BTW8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cdk5rap1Q8BTW8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.49■■□□□ 1.35
Cdk5rap1Q8BTW8 Gm8503-201ENSMUST00000118131 455 ntBASIC23.49■■□□□ 1.35
Cdk5rap1Q8BTW8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.48■■□□□ 1.35
Cdk5rap1Q8BTW8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdk5rap1Q8BTW8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cdk5rap1Q8BTW8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdk5rap1Q8BTW8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdk5rap1Q8BTW8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cdk5rap1Q8BTW8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cdk5rap1Q8BTW8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cdk5rap1Q8BTW8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
Cdk5rap1Q8BTW8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.42■■□□□ 1.34
Cdk5rap1Q8BTW8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Cdk5rap1Q8BTW8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Cdk5rap1Q8BTW8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cdk5rap1Q8BTW8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cdk5rap1Q8BTW8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdk5rap1Q8BTW8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.4■■□□□ 1.34
Cdk5rap1Q8BTW8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Cdk5rap1Q8BTW8 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.39■■□□□ 1.33
Cdk5rap1Q8BTW8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdk5rap1Q8BTW8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdk5rap1Q8BTW8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.38■■□□□ 1.33
Cdk5rap1Q8BTW8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdk5rap1Q8BTW8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cdk5rap1Q8BTW8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Cdk5rap1Q8BTW8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cdk5rap1Q8BTW8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cdk5rap1Q8BTW8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
Cdk5rap1Q8BTW8 Nkain2-201ENSMUST00000092602 558 ntBASIC23.35■■□□□ 1.33
Cdk5rap1Q8BTW8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cdk5rap1Q8BTW8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdk5rap1Q8BTW8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdk5rap1Q8BTW8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdk5rap1Q8BTW8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cdk5rap1Q8BTW8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cdk5rap1Q8BTW8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cdk5rap1Q8BTW8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdk5rap1Q8BTW8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdk5rap1Q8BTW8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdk5rap1Q8BTW8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.3■■□□□ 1.32
Cdk5rap1Q8BTW8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms