Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf38Q8BI21 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf38Q8BI21 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf38Q8BI21 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.95■■□□□ 1.42
Rnf38Q8BI21 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf38Q8BI21 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf38Q8BI21 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf38Q8BI21 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Rnf38Q8BI21 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf38Q8BI21 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Rnf38Q8BI21 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Rnf38Q8BI21 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Rnf38Q8BI21 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.89■■□□□ 1.41
Rnf38Q8BI21 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf38Q8BI21 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf38Q8BI21 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf38Q8BI21 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf38Q8BI21 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf38Q8BI21 Gm24804-201ENSMUST00000174982 85 ntBASIC23.85■■□□□ 1.41
Rnf38Q8BI21 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf38Q8BI21 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf38Q8BI21 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf38Q8BI21 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rnf38Q8BI21 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf38Q8BI21 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.82■■□□□ 1.4
Rnf38Q8BI21 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf38Q8BI21 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Rnf38Q8BI21 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf38Q8BI21 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf38Q8BI21 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rnf38Q8BI21 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rnf38Q8BI21 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf38Q8BI21 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf38Q8BI21 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf38Q8BI21 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Rnf38Q8BI21 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf38Q8BI21 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.75■■□□□ 1.39
Rnf38Q8BI21 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf38Q8BI21 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Rnf38Q8BI21 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf38Q8BI21 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf38Q8BI21 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf38Q8BI21 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf38Q8BI21 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Rnf38Q8BI21 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf38Q8BI21 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.7■■□□□ 1.39
Rnf38Q8BI21 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf38Q8BI21 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf38Q8BI21 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf38Q8BI21 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf38Q8BI21 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf38Q8BI21 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf38Q8BI21 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf38Q8BI21 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.68■■□□□ 1.38
Rnf38Q8BI21 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Rnf38Q8BI21 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf38Q8BI21 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf38Q8BI21 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rnf38Q8BI21 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf38Q8BI21 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Rnf38Q8BI21 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rnf38Q8BI21 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rnf38Q8BI21 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Rnf38Q8BI21 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rnf38Q8BI21 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.64■■□□□ 1.37
Rnf38Q8BI21 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf38Q8BI21 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf38Q8BI21 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf38Q8BI21 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.61■■□□□ 1.37
Rnf38Q8BI21 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf38Q8BI21 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rnf38Q8BI21 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf38Q8BI21 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf38Q8BI21 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rnf38Q8BI21 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf38Q8BI21 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf38Q8BI21 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Rnf38Q8BI21 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.57■■□□□ 1.36
Rnf38Q8BI21 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf38Q8BI21 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rnf38Q8BI21 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf38Q8BI21 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.56■■□□□ 1.36
Rnf38Q8BI21 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf38Q8BI21 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf38Q8BI21 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf38Q8BI21 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rnf38Q8BI21 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf38Q8BI21 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf38Q8BI21 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rnf38Q8BI21 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf38Q8BI21 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf38Q8BI21 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf38Q8BI21 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rnf38Q8BI21 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
Rnf38Q8BI21 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf38Q8BI21 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf38Q8BI21 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf38Q8BI21 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Rnf38Q8BI21 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf38Q8BI21 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms