Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.77■■□□□ 1.4
Skida1Q80YR3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Skida1Q80YR3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Skida1Q80YR3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Skida1Q80YR3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Skida1Q80YR3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Skida1Q80YR3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Skida1Q80YR3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Skida1Q80YR3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Skida1Q80YR3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.7■■□□□ 1.38
Skida1Q80YR3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.7■■□□□ 1.38
Skida1Q80YR3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Skida1Q80YR3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Skida1Q80YR3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Skida1Q80YR3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.66■■□□□ 1.38
Skida1Q80YR3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Skida1Q80YR3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Skida1Q80YR3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.64■■□□□ 1.37
Skida1Q80YR3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Skida1Q80YR3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.63■■□□□ 1.37
Skida1Q80YR3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Skida1Q80YR3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Skida1Q80YR3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Skida1Q80YR3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Skida1Q80YR3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Skida1Q80YR3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Skida1Q80YR3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Skida1Q80YR3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Skida1Q80YR3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Skida1Q80YR3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Nkain2-201ENSMUST00000092602 558 ntBASIC23.56■■□□□ 1.36
Skida1Q80YR3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Skida1Q80YR3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Skida1Q80YR3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
Skida1Q80YR3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Skida1Q80YR3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.54■■□□□ 1.36
Skida1Q80YR3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Skida1Q80YR3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Skida1Q80YR3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Skida1Q80YR3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Skida1Q80YR3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Skida1Q80YR3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Skida1Q80YR3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Skida1Q80YR3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.47■■□□□ 1.35
Skida1Q80YR3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Skida1Q80YR3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Skida1Q80YR3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.47■■□□□ 1.35
Skida1Q80YR3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Skida1Q80YR3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Skida1Q80YR3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Skida1Q80YR3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.44■■□□□ 1.34
Skida1Q80YR3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Skida1Q80YR3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Skida1Q80YR3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Skida1Q80YR3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Skida1Q80YR3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Skida1Q80YR3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Skida1Q80YR3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Skida1Q80YR3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Skida1Q80YR3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Skida1Q80YR3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Skida1Q80YR3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
Skida1Q80YR3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Skida1Q80YR3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Skida1Q80YR3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.35■■□□□ 1.33
Skida1Q80YR3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Skida1Q80YR3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms