Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim36Q80WG7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Trim36Q80WG7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim36Q80WG7 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.52■■□□□ 1.36
Trim36Q80WG7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim36Q80WG7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim36Q80WG7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.5■■□□□ 1.35
Trim36Q80WG7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.5■■□□□ 1.35
Trim36Q80WG7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Trim36Q80WG7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim36Q80WG7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Trim36Q80WG7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trim36Q80WG7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Trim36Q80WG7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Trim36Q80WG7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim36Q80WG7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim36Q80WG7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim36Q80WG7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim36Q80WG7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim36Q80WG7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim36Q80WG7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim36Q80WG7 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.33■■□□□ 1.33
Trim36Q80WG7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim36Q80WG7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.32■■□□□ 1.32
Trim36Q80WG7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim36Q80WG7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim36Q80WG7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.31■■□□□ 1.32
Trim36Q80WG7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim36Q80WG7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Trim36Q80WG7 Gm45855-201ENSMUST00000212546 880 ntBASIC23.31■■□□□ 1.32
Trim36Q80WG7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim36Q80WG7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim36Q80WG7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Gm9397-201ENSMUST00000200125 605 ntBASIC23.21■■□□□ 1.31
Trim36Q80WG7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim36Q80WG7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim36Q80WG7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim36Q80WG7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim36Q80WG7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms