Protein–RNA interactions for Protein: Q6WKZ8

Ubr2, E3 ubiquitin-protein ligase UBR2, mousemouse

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2Q6WKZ8 Gm6821-201ENSMUST00000107540 542 ntBASIC32.4■■■□□ 2.78
Ubr2Q6WKZ8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Ubr2Q6WKZ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC32.37■■■□□ 2.77
Ubr2Q6WKZ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ubr2Q6WKZ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ubr2Q6WKZ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ubr2Q6WKZ8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ubr2Q6WKZ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ubr2Q6WKZ8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ubr2Q6WKZ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ubr2Q6WKZ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Ubr2Q6WKZ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ubr2Q6WKZ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.3■■■□□ 2.76
Ubr2Q6WKZ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ubr2Q6WKZ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ubr2Q6WKZ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ubr2Q6WKZ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Ubr2Q6WKZ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
Ubr2Q6WKZ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.26■■■□□ 2.75
Ubr2Q6WKZ8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ubr2Q6WKZ8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ubr2Q6WKZ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ubr2Q6WKZ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ubr2Q6WKZ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ubr2Q6WKZ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Ubr2Q6WKZ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ubr2Q6WKZ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32.24■■■□□ 2.75
Ubr2Q6WKZ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ubr2Q6WKZ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Ubr2Q6WKZ8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Ubr2Q6WKZ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ubr2Q6WKZ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ubr2Q6WKZ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ubr2Q6WKZ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ubr2Q6WKZ8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Ubr2Q6WKZ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ubr2Q6WKZ8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ubr2Q6WKZ8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ubr2Q6WKZ8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ubr2Q6WKZ8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ubr2Q6WKZ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ubr2Q6WKZ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.09■■■□□ 2.73
Ubr2Q6WKZ8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ubr2Q6WKZ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.07■■■□□ 2.72
Ubr2Q6WKZ8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.07■■■□□ 2.72
Ubr2Q6WKZ8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ubr2Q6WKZ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ubr2Q6WKZ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Ubr2Q6WKZ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.03■■■□□ 2.72
Ubr2Q6WKZ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ubr2Q6WKZ8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ubr2Q6WKZ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ubr2Q6WKZ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.02■■■□□ 2.72
Ubr2Q6WKZ8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32■■■□□ 2.71
Ubr2Q6WKZ8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Ubr2Q6WKZ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ubr2Q6WKZ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.98■■■□□ 2.71
Ubr2Q6WKZ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.97■■■□□ 2.71
Ubr2Q6WKZ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ubr2Q6WKZ8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ubr2Q6WKZ8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ubr2Q6WKZ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.96■■■□□ 2.71
Ubr2Q6WKZ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ubr2Q6WKZ8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.94■■■□□ 2.7
Ubr2Q6WKZ8 Nkain2-201ENSMUST00000092602 558 ntBASIC31.94■■■□□ 2.7
Ubr2Q6WKZ8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ubr2Q6WKZ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ubr2Q6WKZ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ubr2Q6WKZ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ubr2Q6WKZ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Ubr2Q6WKZ8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ubr2Q6WKZ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ubr2Q6WKZ8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ubr2Q6WKZ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ubr2Q6WKZ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Ubr2Q6WKZ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.84■■■□□ 2.69
Ubr2Q6WKZ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ubr2Q6WKZ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.82■■■□□ 2.68
Ubr2Q6WKZ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Ubr2Q6WKZ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.81■■■□□ 2.68
Ubr2Q6WKZ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Ubr2Q6WKZ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.79■■■□□ 2.68
Ubr2Q6WKZ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ubr2Q6WKZ8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.77■■■□□ 2.68
Ubr2Q6WKZ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ubr2Q6WKZ8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
Ubr2Q6WKZ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.74■■■□□ 2.67
Ubr2Q6WKZ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.73■■■□□ 2.67
Ubr2Q6WKZ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Ubr2Q6WKZ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.73■■■□□ 2.67
Ubr2Q6WKZ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ubr2Q6WKZ8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Ubr2Q6WKZ8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr2Q6WKZ8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr2Q6WKZ8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr2Q6WKZ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.68■■■□□ 2.66
Ubr2Q6WKZ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ubr2Q6WKZ8 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.67■■■□□ 2.66
Ubr2Q6WKZ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ubr2Q6WKZ8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.66■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms