Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcp4l1Q6W8Q3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcp4l1Q6W8Q3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcp4l1Q6W8Q3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcp4l1Q6W8Q3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcp4l1Q6W8Q3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcp4l1Q6W8Q3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcp4l1Q6W8Q3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcp4l1Q6W8Q3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
Pcp4l1Q6W8Q3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcp4l1Q6W8Q3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Pcp4l1Q6W8Q3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcp4l1Q6W8Q3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcp4l1Q6W8Q3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcp4l1Q6W8Q3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcp4l1Q6W8Q3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcp4l1Q6W8Q3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcp4l1Q6W8Q3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcp4l1Q6W8Q3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcp4l1Q6W8Q3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcp4l1Q6W8Q3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcp4l1Q6W8Q3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcp4l1Q6W8Q3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcp4l1Q6W8Q3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcp4l1Q6W8Q3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcp4l1Q6W8Q3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcp4l1Q6W8Q3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcp4l1Q6W8Q3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcp4l1Q6W8Q3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcp4l1Q6W8Q3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcp4l1Q6W8Q3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcp4l1Q6W8Q3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcp4l1Q6W8Q3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcp4l1Q6W8Q3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.3■□□□□ 0.84
Pcp4l1Q6W8Q3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcp4l1Q6W8Q3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcp4l1Q6W8Q3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcp4l1Q6W8Q3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.3■□□□□ 0.84
Pcp4l1Q6W8Q3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcp4l1Q6W8Q3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcp4l1Q6W8Q3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcp4l1Q6W8Q3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcp4l1Q6W8Q3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcp4l1Q6W8Q3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcp4l1Q6W8Q3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcp4l1Q6W8Q3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcp4l1Q6W8Q3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcp4l1Q6W8Q3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcp4l1Q6W8Q3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcp4l1Q6W8Q3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcp4l1Q6W8Q3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcp4l1Q6W8Q3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcp4l1Q6W8Q3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcp4l1Q6W8Q3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcp4l1Q6W8Q3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcp4l1Q6W8Q3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcp4l1Q6W8Q3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcp4l1Q6W8Q3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcp4l1Q6W8Q3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Pcp4l1Q6W8Q3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcp4l1Q6W8Q3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcp4l1Q6W8Q3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcp4l1Q6W8Q3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Pcp4l1Q6W8Q3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcp4l1Q6W8Q3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcp4l1Q6W8Q3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcp4l1Q6W8Q3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcp4l1Q6W8Q3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcp4l1Q6W8Q3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcp4l1Q6W8Q3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcp4l1Q6W8Q3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcp4l1Q6W8Q3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcp4l1Q6W8Q3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcp4l1Q6W8Q3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcp4l1Q6W8Q3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Pcp4l1Q6W8Q3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcp4l1Q6W8Q3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcp4l1Q6W8Q3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcp4l1Q6W8Q3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcp4l1Q6W8Q3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcp4l1Q6W8Q3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcp4l1Q6W8Q3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcp4l1Q6W8Q3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcp4l1Q6W8Q3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcp4l1Q6W8Q3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcp4l1Q6W8Q3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcp4l1Q6W8Q3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcp4l1Q6W8Q3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcp4l1Q6W8Q3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Pcp4l1Q6W8Q3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcp4l1Q6W8Q3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcp4l1Q6W8Q3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms