Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Cgnl1Q6AW69 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Cgnl1Q6AW69 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.61■■■□□ 2.49
Cgnl1Q6AW69 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cgnl1Q6AW69 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cgnl1Q6AW69 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Cgnl1Q6AW69 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cgnl1Q6AW69 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
Cgnl1Q6AW69 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cgnl1Q6AW69 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cgnl1Q6AW69 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Cgnl1Q6AW69 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cgnl1Q6AW69 Amer2-203ENSMUST00000225247 2662 ntBASIC30.55■■■□□ 2.48
Cgnl1Q6AW69 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Cgnl1Q6AW69 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cgnl1Q6AW69 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cgnl1Q6AW69 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cgnl1Q6AW69 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cgnl1Q6AW69 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Cgnl1Q6AW69 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Cgnl1Q6AW69 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.47
Cgnl1Q6AW69 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.51■■■□□ 2.47
Cgnl1Q6AW69 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.51■■■□□ 2.47
Cgnl1Q6AW69 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Cgnl1Q6AW69 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.5■■■□□ 2.47
Cgnl1Q6AW69 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Cgnl1Q6AW69 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Cgnl1Q6AW69 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cgnl1Q6AW69 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cgnl1Q6AW69 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Cgnl1Q6AW69 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Cgnl1Q6AW69 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Cgnl1Q6AW69 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cgnl1Q6AW69 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cgnl1Q6AW69 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cgnl1Q6AW69 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
Cgnl1Q6AW69 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cgnl1Q6AW69 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.43■■■□□ 2.46
Cgnl1Q6AW69 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cgnl1Q6AW69 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cgnl1Q6AW69 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cgnl1Q6AW69 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cgnl1Q6AW69 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cgnl1Q6AW69 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cgnl1Q6AW69 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cgnl1Q6AW69 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cgnl1Q6AW69 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.38■■■□□ 2.45
Cgnl1Q6AW69 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.38■■■□□ 2.45
Cgnl1Q6AW69 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cgnl1Q6AW69 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Cgnl1Q6AW69 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Cgnl1Q6AW69 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Cgnl1Q6AW69 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cgnl1Q6AW69 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Cgnl1Q6AW69 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.34■■■□□ 2.45
Cgnl1Q6AW69 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.33■■■□□ 2.45
Cgnl1Q6AW69 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cgnl1Q6AW69 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.32■■■□□ 2.44
Cgnl1Q6AW69 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Cgnl1Q6AW69 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Cgnl1Q6AW69 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cgnl1Q6AW69 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cgnl1Q6AW69 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cgnl1Q6AW69 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Cgnl1Q6AW69 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cgnl1Q6AW69 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cgnl1Q6AW69 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Cgnl1Q6AW69 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Cgnl1Q6AW69 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.23■■■□□ 2.43
Cgnl1Q6AW69 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cgnl1Q6AW69 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cgnl1Q6AW69 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cgnl1Q6AW69 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cgnl1Q6AW69 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cgnl1Q6AW69 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cgnl1Q6AW69 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cgnl1Q6AW69 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cgnl1Q6AW69 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cgnl1Q6AW69 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cgnl1Q6AW69 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.19■■■□□ 2.42
Cgnl1Q6AW69 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cgnl1Q6AW69 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cgnl1Q6AW69 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cgnl1Q6AW69 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.17■■■□□ 2.42
Cgnl1Q6AW69 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cgnl1Q6AW69 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cgnl1Q6AW69 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cgnl1Q6AW69 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cgnl1Q6AW69 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cgnl1Q6AW69 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Cgnl1Q6AW69 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Cgnl1Q6AW69 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cgnl1Q6AW69 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cgnl1Q6AW69 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Cgnl1Q6AW69 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Cgnl1Q6AW69 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cgnl1Q6AW69 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Cgnl1Q6AW69 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Cgnl1Q6AW69 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cgnl1Q6AW69 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms