Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox16Q62247 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox16Q62247 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox16Q62247 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox16Q62247 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Sox16Q62247 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox16Q62247 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox16Q62247 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox16Q62247 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox16Q62247 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox16Q62247 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox16Q62247 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox16Q62247 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Sox16Q62247 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox16Q62247 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox16Q62247 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox16Q62247 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox16Q62247 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox16Q62247 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox16Q62247 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox16Q62247 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox16Q62247 CT025624.2-201ENSMUST00000223609 1909 ntBASIC14.3□□□□□ -0.12
Sox16Q62247 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox16Q62247 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox16Q62247 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox16Q62247 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox16Q62247 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox16Q62247 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox16Q62247 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sox16Q62247 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox16Q62247 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox16Q62247 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox16Q62247 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox16Q62247 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox16Q62247 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox16Q62247 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox16Q62247 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox16Q62247 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.27□□□□□ -0.12
Sox16Q62247 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox16Q62247 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox16Q62247 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox16Q62247 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox16Q62247 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox16Q62247 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox16Q62247 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox16Q62247 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox16Q62247 Gm2415-204ENSMUST00000190235 2004 ntBASIC14.25□□□□□ -0.13
Sox16Q62247 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox16Q62247 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox16Q62247 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox16Q62247 Fezf2-202ENSMUST00000224023 1917 ntBASIC14.24□□□□□ -0.13
Sox16Q62247 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox16Q62247 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox16Q62247 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox16Q62247 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox16Q62247 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox16Q62247 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox16Q62247 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox16Q62247 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox16Q62247 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox16Q62247 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox16Q62247 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox16Q62247 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox16Q62247 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox16Q62247 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox16Q62247 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox16Q62247 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox16Q62247 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox16Q62247 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox16Q62247 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox16Q62247 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox16Q62247 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox16Q62247 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox16Q62247 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox16Q62247 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox16Q62247 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox16Q62247 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox16Q62247 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox16Q62247 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox16Q62247 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox16Q62247 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox16Q62247 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox16Q62247 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox16Q62247 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox16Q62247 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox16Q62247 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.12□□□□□ -0.15
Sox16Q62247 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox16Q62247 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox16Q62247 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Sox16Q62247 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox16Q62247 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox16Q62247 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox16Q62247 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox16Q62247 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox16Q62247 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox16Q62247 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox16Q62247 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox16Q62247 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox16Q62247 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox16Q62247 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms