Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cmc4Q61908 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cmc4Q61908 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cmc4Q61908 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cmc4Q61908 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cmc4Q61908 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cmc4Q61908 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cmc4Q61908 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cmc4Q61908 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.09■□□□□ 0.49
Cmc4Q61908 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.09■□□□□ 0.49
Cmc4Q61908 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cmc4Q61908 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.08■□□□□ 0.48
Cmc4Q61908 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cmc4Q61908 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cmc4Q61908 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cmc4Q61908 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cmc4Q61908 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cmc4Q61908 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.05■□□□□ 0.48
Cmc4Q61908 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cmc4Q61908 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cmc4Q61908 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cmc4Q61908 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cmc4Q61908 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cmc4Q61908 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cmc4Q61908 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cmc4Q61908 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.03■□□□□ 0.48
Cmc4Q61908 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cmc4Q61908 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cmc4Q61908 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cmc4Q61908 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cmc4Q61908 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.01■□□□□ 0.47
Cmc4Q61908 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cmc4Q61908 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cmc4Q61908 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cmc4Q61908 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cmc4Q61908 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cmc4Q61908 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cmc4Q61908 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cmc4Q61908 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18■□□□□ 0.47
Cmc4Q61908 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18■□□□□ 0.47
Cmc4Q61908 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cmc4Q61908 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cmc4Q61908 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cmc4Q61908 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cmc4Q61908 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cmc4Q61908 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cmc4Q61908 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cmc4Q61908 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cmc4Q61908 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cmc4Q61908 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.96■□□□□ 0.47
Cmc4Q61908 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cmc4Q61908 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cmc4Q61908 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cmc4Q61908 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cmc4Q61908 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cmc4Q61908 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cmc4Q61908 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Cmc4Q61908 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cmc4Q61908 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cmc4Q61908 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cmc4Q61908 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cmc4Q61908 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cmc4Q61908 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cmc4Q61908 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cmc4Q61908 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cmc4Q61908 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cmc4Q61908 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cmc4Q61908 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Cmc4Q61908 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cmc4Q61908 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.89■□□□□ 0.45
Cmc4Q61908 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cmc4Q61908 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.89■□□□□ 0.45
Cmc4Q61908 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cmc4Q61908 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cmc4Q61908 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cmc4Q61908 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cmc4Q61908 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.87■□□□□ 0.45
Cmc4Q61908 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.86■□□□□ 0.45
Cmc4Q61908 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.86■□□□□ 0.45
Cmc4Q61908 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cmc4Q61908 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cmc4Q61908 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cmc4Q61908 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cmc4Q61908 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.85■□□□□ 0.45
Cmc4Q61908 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.85■□□□□ 0.45
Cmc4Q61908 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cmc4Q61908 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cmc4Q61908 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cmc4Q61908 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cmc4Q61908 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cmc4Q61908 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.83■□□□□ 0.44
Cmc4Q61908 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cmc4Q61908 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.82■□□□□ 0.44
Cmc4Q61908 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cmc4Q61908 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cmc4Q61908 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.81■□□□□ 0.44
Cmc4Q61908 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.81■□□□□ 0.44
Cmc4Q61908 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cmc4Q61908 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cmc4Q61908 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms