Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trp53rkaQ5U452 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trp53rkaQ5U452 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trp53rkaQ5U452 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trp53rkaQ5U452 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trp53rkaQ5U452 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trp53rkaQ5U452 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trp53rkaQ5U452 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trp53rkaQ5U452 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trp53rkaQ5U452 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trp53rkaQ5U452 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trp53rkaQ5U452 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trp53rkaQ5U452 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trp53rkaQ5U452 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Trp53rkaQ5U452 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.2■□□□□ 0.66
Trp53rkaQ5U452 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trp53rkaQ5U452 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trp53rkaQ5U452 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trp53rkaQ5U452 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trp53rkaQ5U452 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.19■□□□□ 0.66
Trp53rkaQ5U452 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trp53rkaQ5U452 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trp53rkaQ5U452 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trp53rkaQ5U452 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trp53rkaQ5U452 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trp53rkaQ5U452 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.17■□□□□ 0.66
Trp53rkaQ5U452 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trp53rkaQ5U452 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trp53rkaQ5U452 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trp53rkaQ5U452 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trp53rkaQ5U452 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trp53rkaQ5U452 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trp53rkaQ5U452 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
Trp53rkaQ5U452 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trp53rkaQ5U452 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trp53rkaQ5U452 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trp53rkaQ5U452 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trp53rkaQ5U452 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.11■□□□□ 0.65
Trp53rkaQ5U452 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trp53rkaQ5U452 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trp53rkaQ5U452 Gm25262-201ENSMUST00000174934 133 ntBASIC19.09■□□□□ 0.65
Trp53rkaQ5U452 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trp53rkaQ5U452 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trp53rkaQ5U452 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trp53rkaQ5U452 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trp53rkaQ5U452 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trp53rkaQ5U452 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
Trp53rkaQ5U452 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trp53rkaQ5U452 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trp53rkaQ5U452 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trp53rkaQ5U452 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trp53rkaQ5U452 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trp53rkaQ5U452 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trp53rkaQ5U452 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.05■□□□□ 0.64
Trp53rkaQ5U452 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trp53rkaQ5U452 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trp53rkaQ5U452 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trp53rkaQ5U452 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trp53rkaQ5U452 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trp53rkaQ5U452 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trp53rkaQ5U452 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trp53rkaQ5U452 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trp53rkaQ5U452 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53rkaQ5U452 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trp53rkaQ5U452 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trp53rkaQ5U452 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trp53rkaQ5U452 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.01■□□□□ 0.63
Trp53rkaQ5U452 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trp53rkaQ5U452 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53rkaQ5U452 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trp53rkaQ5U452 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53rkaQ5U452 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trp53rkaQ5U452 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trp53rkaQ5U452 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53rkaQ5U452 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53rkaQ5U452 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.98■□□□□ 0.63
Trp53rkaQ5U452 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trp53rkaQ5U452 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Trp53rkaQ5U452 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trp53rkaQ5U452 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trp53rkaQ5U452 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53rkaQ5U452 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trp53rkaQ5U452 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trp53rkaQ5U452 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trp53rkaQ5U452 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trp53rkaQ5U452 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trp53rkaQ5U452 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.94■□□□□ 0.62
Trp53rkaQ5U452 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms