Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lin28bQ45KJ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.81■■□□□ 1.4
Lin28bQ45KJ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lin28bQ45KJ6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Lin28bQ45KJ6 Gm6821-201ENSMUST00000107540 542 ntBASIC23.78■■□□□ 1.4
Lin28bQ45KJ6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Lin28bQ45KJ6 Gm8503-201ENSMUST00000118131 455 ntBASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.77■■□□□ 1.4
Lin28bQ45KJ6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Lin28bQ45KJ6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Lin28bQ45KJ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Lin28bQ45KJ6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Lin28bQ45KJ6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Lin28bQ45KJ6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lin28bQ45KJ6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Lin28bQ45KJ6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.7■■□□□ 1.39
Lin28bQ45KJ6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Lin28bQ45KJ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Lin28bQ45KJ6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Lin28bQ45KJ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Lin28bQ45KJ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Lin28bQ45KJ6 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Lin28bQ45KJ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Lin28bQ45KJ6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Lin28bQ45KJ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Lin28bQ45KJ6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lin28bQ45KJ6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Lin28bQ45KJ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lin28bQ45KJ6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lin28bQ45KJ6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.57■■□□□ 1.36
Lin28bQ45KJ6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Lin28bQ45KJ6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Lin28bQ45KJ6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lin28bQ45KJ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Lin28bQ45KJ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Nkain2-201ENSMUST00000092602 558 ntBASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lin28bQ45KJ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Lin28bQ45KJ6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lin28bQ45KJ6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lin28bQ45KJ6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lin28bQ45KJ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lin28bQ45KJ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Lin28bQ45KJ6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Lin28bQ45KJ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lin28bQ45KJ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.44■■□□□ 1.34
Lin28bQ45KJ6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lin28bQ45KJ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lin28bQ45KJ6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lin28bQ45KJ6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Lin28bQ45KJ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.4■■□□□ 1.34
Lin28bQ45KJ6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lin28bQ45KJ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lin28bQ45KJ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lin28bQ45KJ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.36■■□□□ 1.33
Lin28bQ45KJ6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lin28bQ45KJ6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.34■■□□□ 1.33
Lin28bQ45KJ6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms