Protein–RNA interactions for Protein: Q3ZN08

Fam220a, Protein FAM220A, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam220aQ3ZN08 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fam220aQ3ZN08 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Fam220aQ3ZN08 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Fam220aQ3ZN08 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Fam220aQ3ZN08 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam220aQ3ZN08 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Fam220aQ3ZN08 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam220aQ3ZN08 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam220aQ3ZN08 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Fam220aQ3ZN08 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fam220aQ3ZN08 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam220aQ3ZN08 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam220aQ3ZN08 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam220aQ3ZN08 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam220aQ3ZN08 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam220aQ3ZN08 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam220aQ3ZN08 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam220aQ3ZN08 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam220aQ3ZN08 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam220aQ3ZN08 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam220aQ3ZN08 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.49■□□□□ 0.87
Fam220aQ3ZN08 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam220aQ3ZN08 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam220aQ3ZN08 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Fam220aQ3ZN08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Fam220aQ3ZN08 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam220aQ3ZN08 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.46■□□□□ 0.87
Fam220aQ3ZN08 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Fam220aQ3ZN08 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.45■□□□□ 0.86
Fam220aQ3ZN08 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam220aQ3ZN08 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Fam220aQ3ZN08 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam220aQ3ZN08 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fam220aQ3ZN08 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.43■□□□□ 0.86
Fam220aQ3ZN08 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam220aQ3ZN08 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam220aQ3ZN08 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam220aQ3ZN08 Gm16148-201ENSMUST00000119653 893 ntBASIC20.42■□□□□ 0.86
Fam220aQ3ZN08 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam220aQ3ZN08 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam220aQ3ZN08 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.41■□□□□ 0.86
Fam220aQ3ZN08 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam220aQ3ZN08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam220aQ3ZN08 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam220aQ3ZN08 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Fam220aQ3ZN08 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Fam220aQ3ZN08 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Fam220aQ3ZN08 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam220aQ3ZN08 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam220aQ3ZN08 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam220aQ3ZN08 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.35■□□□□ 0.85
Fam220aQ3ZN08 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fam220aQ3ZN08 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fam220aQ3ZN08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam220aQ3ZN08 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam220aQ3ZN08 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fam220aQ3ZN08 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam220aQ3ZN08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam220aQ3ZN08 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam220aQ3ZN08 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Fam220aQ3ZN08 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam220aQ3ZN08 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam220aQ3ZN08 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Fam220aQ3ZN08 Amer2-203ENSMUST00000225247 2662 ntBASIC20.3■□□□□ 0.84
Fam220aQ3ZN08 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam220aQ3ZN08 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam220aQ3ZN08 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam220aQ3ZN08 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam220aQ3ZN08 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam220aQ3ZN08 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam220aQ3ZN08 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.27■□□□□ 0.84
Fam220aQ3ZN08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam220aQ3ZN08 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.26■□□□□ 0.83
Fam220aQ3ZN08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam220aQ3ZN08 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam220aQ3ZN08 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam220aQ3ZN08 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam220aQ3ZN08 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam220aQ3ZN08 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.24■□□□□ 0.83
Fam220aQ3ZN08 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam220aQ3ZN08 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam220aQ3ZN08 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam220aQ3ZN08 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam220aQ3ZN08 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam220aQ3ZN08 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.19■□□□□ 0.82
Fam220aQ3ZN08 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam220aQ3ZN08 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam220aQ3ZN08 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam220aQ3ZN08 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms