Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
Pls1Q3V0K9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.82■■■□□ 2.2
Pls1Q3V0K9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pls1Q3V0K9 Gm6821-201ENSMUST00000107540 542 ntBASIC28.81■■■□□ 2.2
Pls1Q3V0K9 Gm8503-201ENSMUST00000118131 455 ntBASIC28.8■■■□□ 2.2
Pls1Q3V0K9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Pls1Q3V0K9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pls1Q3V0K9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pls1Q3V0K9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pls1Q3V0K9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pls1Q3V0K9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.76■■■□□ 2.19
Pls1Q3V0K9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Pls1Q3V0K9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pls1Q3V0K9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pls1Q3V0K9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pls1Q3V0K9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pls1Q3V0K9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pls1Q3V0K9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.74■■■□□ 2.19
Pls1Q3V0K9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pls1Q3V0K9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.72■■■□□ 2.19
Pls1Q3V0K9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pls1Q3V0K9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pls1Q3V0K9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.71■■■□□ 2.19
Pls1Q3V0K9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pls1Q3V0K9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
Pls1Q3V0K9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pls1Q3V0K9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pls1Q3V0K9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pls1Q3V0K9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pls1Q3V0K9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Pls1Q3V0K9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Pls1Q3V0K9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pls1Q3V0K9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.64■■■□□ 2.18
Pls1Q3V0K9 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.64■■■□□ 2.18
Pls1Q3V0K9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Pls1Q3V0K9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pls1Q3V0K9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pls1Q3V0K9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Pls1Q3V0K9 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.6■■■□□ 2.17
Pls1Q3V0K9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Pls1Q3V0K9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pls1Q3V0K9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pls1Q3V0K9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pls1Q3V0K9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pls1Q3V0K9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pls1Q3V0K9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pls1Q3V0K9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Pls1Q3V0K9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pls1Q3V0K9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Pls1Q3V0K9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pls1Q3V0K9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pls1Q3V0K9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pls1Q3V0K9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pls1Q3V0K9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pls1Q3V0K9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.5■■■□□ 2.15
Pls1Q3V0K9 Nkain2-201ENSMUST00000092602 558 ntBASIC28.5■■■□□ 2.15
Pls1Q3V0K9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pls1Q3V0K9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.49■■■□□ 2.15
Pls1Q3V0K9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pls1Q3V0K9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Pls1Q3V0K9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pls1Q3V0K9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pls1Q3V0K9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.47■■■□□ 2.15
Pls1Q3V0K9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pls1Q3V0K9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Pls1Q3V0K9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.46■■■□□ 2.15
Pls1Q3V0K9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Pls1Q3V0K9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pls1Q3V0K9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pls1Q3V0K9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pls1Q3V0K9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pls1Q3V0K9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Pls1Q3V0K9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pls1Q3V0K9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.39■■■□□ 2.14
Pls1Q3V0K9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pls1Q3V0K9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pls1Q3V0K9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pls1Q3V0K9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pls1Q3V0K9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pls1Q3V0K9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
Pls1Q3V0K9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.37■■■□□ 2.13
Pls1Q3V0K9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.37■■■□□ 2.13
Pls1Q3V0K9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pls1Q3V0K9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.35■■■□□ 2.13
Pls1Q3V0K9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pls1Q3V0K9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.33■■■□□ 2.13
Pls1Q3V0K9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pls1Q3V0K9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
Pls1Q3V0K9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pls1Q3V0K9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pls1Q3V0K9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pls1Q3V0K9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pls1Q3V0K9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pls1Q3V0K9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pls1Q3V0K9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Pls1Q3V0K9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pls1Q3V0K9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pls1Q3V0K9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pls1Q3V0K9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Pls1Q3V0K9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.26■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms