Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
B020004J07RikQ3UTC0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
B020004J07RikQ3UTC0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.26■■□□□ 1.79
B020004J07RikQ3UTC0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
B020004J07RikQ3UTC0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
B020004J07RikQ3UTC0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
B020004J07RikQ3UTC0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
B020004J07RikQ3UTC0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
B020004J07RikQ3UTC0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.23■■□□□ 1.79
B020004J07RikQ3UTC0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
B020004J07RikQ3UTC0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
B020004J07RikQ3UTC0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.21■■□□□ 1.79
B020004J07RikQ3UTC0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
B020004J07RikQ3UTC0 Gm6821-201ENSMUST00000107540 542 ntBASIC26.2■■□□□ 1.78
B020004J07RikQ3UTC0 Gm8503-201ENSMUST00000118131 455 ntBASIC26.2■■□□□ 1.78
B020004J07RikQ3UTC0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
B020004J07RikQ3UTC0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
B020004J07RikQ3UTC0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
B020004J07RikQ3UTC0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
B020004J07RikQ3UTC0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
B020004J07RikQ3UTC0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
B020004J07RikQ3UTC0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
B020004J07RikQ3UTC0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
B020004J07RikQ3UTC0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
B020004J07RikQ3UTC0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
B020004J07RikQ3UTC0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
B020004J07RikQ3UTC0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.17■■□□□ 1.78
B020004J07RikQ3UTC0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
B020004J07RikQ3UTC0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
B020004J07RikQ3UTC0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.14■■□□□ 1.77
B020004J07RikQ3UTC0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
B020004J07RikQ3UTC0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
B020004J07RikQ3UTC0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
B020004J07RikQ3UTC0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
B020004J07RikQ3UTC0 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.11■■□□□ 1.77
B020004J07RikQ3UTC0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
B020004J07RikQ3UTC0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
B020004J07RikQ3UTC0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
B020004J07RikQ3UTC0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
B020004J07RikQ3UTC0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
B020004J07RikQ3UTC0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.07■■□□□ 1.76
B020004J07RikQ3UTC0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
B020004J07RikQ3UTC0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
B020004J07RikQ3UTC0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
B020004J07RikQ3UTC0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
B020004J07RikQ3UTC0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
B020004J07RikQ3UTC0 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.04■■□□□ 1.76
B020004J07RikQ3UTC0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
B020004J07RikQ3UTC0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
B020004J07RikQ3UTC0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
B020004J07RikQ3UTC0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
B020004J07RikQ3UTC0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
B020004J07RikQ3UTC0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
B020004J07RikQ3UTC0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
B020004J07RikQ3UTC0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26■■□□□ 1.75
B020004J07RikQ3UTC0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
B020004J07RikQ3UTC0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
B020004J07RikQ3UTC0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
B020004J07RikQ3UTC0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
B020004J07RikQ3UTC0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
B020004J07RikQ3UTC0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
B020004J07RikQ3UTC0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.96■■□□□ 1.75
B020004J07RikQ3UTC0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
B020004J07RikQ3UTC0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
B020004J07RikQ3UTC0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
B020004J07RikQ3UTC0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
B020004J07RikQ3UTC0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
B020004J07RikQ3UTC0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
B020004J07RikQ3UTC0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
B020004J07RikQ3UTC0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
B020004J07RikQ3UTC0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.87■■□□□ 1.73
B020004J07RikQ3UTC0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
B020004J07RikQ3UTC0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.87■■□□□ 1.73
B020004J07RikQ3UTC0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
B020004J07RikQ3UTC0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
B020004J07RikQ3UTC0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
B020004J07RikQ3UTC0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
B020004J07RikQ3UTC0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.84■■□□□ 1.73
B020004J07RikQ3UTC0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
B020004J07RikQ3UTC0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
B020004J07RikQ3UTC0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
B020004J07RikQ3UTC0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
B020004J07RikQ3UTC0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.8■■□□□ 1.72
B020004J07RikQ3UTC0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
B020004J07RikQ3UTC0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
B020004J07RikQ3UTC0 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.8■■□□□ 1.72
B020004J07RikQ3UTC0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
B020004J07RikQ3UTC0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
B020004J07RikQ3UTC0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
B020004J07RikQ3UTC0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
B020004J07RikQ3UTC0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.78■■□□□ 1.72
B020004J07RikQ3UTC0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
B020004J07RikQ3UTC0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
B020004J07RikQ3UTC0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.75■■□□□ 1.71
B020004J07RikQ3UTC0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms