Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Shisa3Q3UPR0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa3Q3UPR0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa3Q3UPR0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa3Q3UPR0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Shisa3Q3UPR0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa3Q3UPR0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Shisa3Q3UPR0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Shisa3Q3UPR0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa3Q3UPR0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa3Q3UPR0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa3Q3UPR0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Shisa3Q3UPR0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa3Q3UPR0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa3Q3UPR0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Shisa3Q3UPR0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.33■■□□□ 1
Shisa3Q3UPR0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shisa3Q3UPR0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa3Q3UPR0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.32■■□□□ 1
Shisa3Q3UPR0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Shisa3Q3UPR0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa3Q3UPR0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.31■■□□□ 1
Shisa3Q3UPR0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa3Q3UPR0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shisa3Q3UPR0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shisa3Q3UPR0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa3Q3UPR0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Shisa3Q3UPR0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa3Q3UPR0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Shisa3Q3UPR0 Gm24804-201ENSMUST00000174982 85 ntBASIC21.25■□□□□ 0.99
Shisa3Q3UPR0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shisa3Q3UPR0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa3Q3UPR0 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.24■□□□□ 0.99
Shisa3Q3UPR0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa3Q3UPR0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa3Q3UPR0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa3Q3UPR0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa3Q3UPR0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.21■□□□□ 0.99
Shisa3Q3UPR0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Shisa3Q3UPR0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa3Q3UPR0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa3Q3UPR0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa3Q3UPR0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.2■□□□□ 0.98
Shisa3Q3UPR0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Shisa3Q3UPR0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa3Q3UPR0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Shisa3Q3UPR0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.18■□□□□ 0.98
Shisa3Q3UPR0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa3Q3UPR0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa3Q3UPR0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Shisa3Q3UPR0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa3Q3UPR0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa3Q3UPR0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa3Q3UPR0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa3Q3UPR0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa3Q3UPR0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.98
Shisa3Q3UPR0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa3Q3UPR0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.14■□□□□ 0.97
Shisa3Q3UPR0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa3Q3UPR0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa3Q3UPR0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa3Q3UPR0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa3Q3UPR0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.13■□□□□ 0.97
Shisa3Q3UPR0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shisa3Q3UPR0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa3Q3UPR0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa3Q3UPR0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shisa3Q3UPR0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa3Q3UPR0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa3Q3UPR0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa3Q3UPR0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa3Q3UPR0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Shisa3Q3UPR0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa3Q3UPR0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.08■□□□□ 0.96
Shisa3Q3UPR0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa3Q3UPR0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa3Q3UPR0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Shisa3Q3UPR0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Shisa3Q3UPR0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa3Q3UPR0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.06■□□□□ 0.96
Shisa3Q3UPR0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa3Q3UPR0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa3Q3UPR0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Shisa3Q3UPR0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa3Q3UPR0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa3Q3UPR0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa3Q3UPR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa3Q3UPR0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa3Q3UPR0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Shisa3Q3UPR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa3Q3UPR0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Shisa3Q3UPR0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Shisa3Q3UPR0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa3Q3UPR0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa3Q3UPR0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa3Q3UPR0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa3Q3UPR0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Shisa3Q3UPR0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa3Q3UPR0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa3Q3UPR0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms