Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.28□□□□□ -0.12
Ush2AQ2QI47 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ush2AQ2QI47 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ush2AQ2QI47 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ush2AQ2QI47 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ush2AQ2QI47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush2AQ2QI47 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ush2AQ2QI47 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.26□□□□□ -0.13
Ush2AQ2QI47 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC14.25□□□□□ -0.13
Ush2AQ2QI47 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush2AQ2QI47 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ush2AQ2QI47 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ush2AQ2QI47 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ush2AQ2QI47 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ush2AQ2QI47 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ush2AQ2QI47 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ush2AQ2QI47 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ush2AQ2QI47 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush2AQ2QI47 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush2AQ2QI47 Gm5812-201ENSMUST00000061073 957 ntBASIC14.21□□□□□ -0.13
Ush2AQ2QI47 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.21□□□□□ -0.13
Ush2AQ2QI47 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush2AQ2QI47 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ush2AQ2QI47 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ush2AQ2QI47 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush2AQ2QI47 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ush2AQ2QI47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ush2AQ2QI47 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ush2AQ2QI47 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ush2AQ2QI47 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ush2AQ2QI47 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
Ush2AQ2QI47 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush2AQ2QI47 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ush2AQ2QI47 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ush2AQ2QI47 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush2AQ2QI47 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ush2AQ2QI47 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ush2AQ2QI47 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ush2AQ2QI47 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Gm12366-201ENSMUST00000121722 873 ntBASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Gm5786-201ENSMUST00000085368 882 ntBASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ush2AQ2QI47 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ush2AQ2QI47 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ush2AQ2QI47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ush2AQ2QI47 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.12□□□□□ -0.15
Ush2AQ2QI47 Gm6311-201ENSMUST00000073790 878 ntBASIC14.11□□□□□ -0.15
Ush2AQ2QI47 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ush2AQ2QI47 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ush2AQ2QI47 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Ush2AQ2QI47 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ush2AQ2QI47 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ush2AQ2QI47 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ush2AQ2QI47 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.07□□□□□ -0.16
Ush2AQ2QI47 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.07□□□□□ -0.16
Ush2AQ2QI47 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ush2AQ2QI47 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ush2AQ2QI47 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
Ush2AQ2QI47 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Serp2-204ENSMUST00000228055 705 ntBASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Gm4799-201ENSMUST00000095396 657 ntBASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush2AQ2QI47 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush2AQ2QI47 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ush2AQ2QI47 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush2AQ2QI47 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.05□□□□□ -0.16
Ush2AQ2QI47 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.04□□□□□ -0.16
Ush2AQ2QI47 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ush2AQ2QI47 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush2AQ2QI47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush2AQ2QI47 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.02□□□□□ -0.16
Ush2AQ2QI47 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ush2AQ2QI47 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.02□□□□□ -0.17
Ush2AQ2QI47 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush2AQ2QI47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush2AQ2QI47 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14□□□□□ -0.17
Ush2AQ2QI47 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush2AQ2QI47 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ush2AQ2QI47 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.98□□□□□ -0.17
Ush2AQ2QI47 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ush2AQ2QI47 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.98□□□□□ -0.17
Ush2AQ2QI47 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ush2AQ2QI47 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ush2AQ2QI47 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ush2AQ2QI47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ush2AQ2QI47 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.96□□□□□ -0.17
Ush2AQ2QI47 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ush2AQ2QI47 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms