Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trim43cP86449 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trim43cP86449 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trim43cP86449 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.28■■□□□ 1.96
Trim43cP86449 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.27■■□□□ 1.96
Trim43cP86449 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Trim43cP86449 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim43cP86449 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Trim43cP86449 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Trim43cP86449 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Trim43cP86449 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim43cP86449 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.23■■□□□ 1.95
Trim43cP86449 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim43cP86449 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim43cP86449 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trim43cP86449 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim43cP86449 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.2■■□□□ 1.95
Trim43cP86449 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim43cP86449 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.19■■□□□ 1.94
Trim43cP86449 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim43cP86449 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.16■■□□□ 1.94
Trim43cP86449 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Trim43cP86449 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim43cP86449 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim43cP86449 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim43cP86449 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.15■■□□□ 1.94
Trim43cP86449 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.13■■□□□ 1.93
Trim43cP86449 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.12■■□□□ 1.93
Trim43cP86449 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim43cP86449 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trim43cP86449 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.11■■□□□ 1.93
Trim43cP86449 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim43cP86449 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
Trim43cP86449 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.1■■□□□ 1.93
Trim43cP86449 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Trim43cP86449 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.09■■□□□ 1.93
Trim43cP86449 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim43cP86449 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim43cP86449 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.05■■□□□ 1.92
Trim43cP86449 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim43cP86449 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim43cP86449 Gm9397-201ENSMUST00000200125 605 ntBASIC27.04■■□□□ 1.92
Trim43cP86449 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim43cP86449 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Trim43cP86449 Amer2-203ENSMUST00000225247 2662 ntBASIC27.03■■□□□ 1.92
Trim43cP86449 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim43cP86449 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim43cP86449 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim43cP86449 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim43cP86449 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim43cP86449 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Trim43cP86449 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trim43cP86449 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.99■■□□□ 1.91
Trim43cP86449 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Trim43cP86449 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim43cP86449 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim43cP86449 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Trim43cP86449 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
Trim43cP86449 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim43cP86449 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.94■■□□□ 1.9
Trim43cP86449 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Trim43cP86449 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim43cP86449 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Trim43cP86449 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.93■■□□□ 1.9
Trim43cP86449 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.92■■□□□ 1.9
Trim43cP86449 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.92■■□□□ 1.9
Trim43cP86449 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim43cP86449 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim43cP86449 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.9■■□□□ 1.9
Trim43cP86449 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.9■■□□□ 1.9
Trim43cP86449 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Trim43cP86449 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.89■■□□□ 1.9
Trim43cP86449 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.89■■□□□ 1.9
Trim43cP86449 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Trim43cP86449 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim43cP86449 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Trim43cP86449 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim43cP86449 Gm24970-201ENSMUST00000175582 82 ntBASIC26.87■■□□□ 1.89
Trim43cP86449 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.86■■□□□ 1.89
Trim43cP86449 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Trim43cP86449 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim43cP86449 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trim43cP86449 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trim43cP86449 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Trim43cP86449 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Trim43cP86449 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim43cP86449 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms