Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccr8P56484 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccr8P56484 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccr8P56484 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.25■□□□□ 0.99
Ccr8P56484 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.24■□□□□ 0.99
Ccr8P56484 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr8P56484 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr8P56484 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccr8P56484 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccr8P56484 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccr8P56484 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.21■□□□□ 0.99
Ccr8P56484 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccr8P56484 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr8P56484 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccr8P56484 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.2■□□□□ 0.98
Ccr8P56484 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr8P56484 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr8P56484 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccr8P56484 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.18■□□□□ 0.98
Ccr8P56484 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccr8P56484 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccr8P56484 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.17■□□□□ 0.98
Ccr8P56484 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr8P56484 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.16■□□□□ 0.98
Ccr8P56484 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccr8P56484 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr8P56484 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr8P56484 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccr8P56484 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Ccr8P56484 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.14■□□□□ 0.98
Ccr8P56484 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccr8P56484 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.12■□□□□ 0.97
Ccr8P56484 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccr8P56484 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccr8P56484 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.11■□□□□ 0.97
Ccr8P56484 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccr8P56484 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccr8P56484 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccr8P56484 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccr8P56484 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr8P56484 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr8P56484 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccr8P56484 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccr8P56484 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccr8P56484 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccr8P56484 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ccr8P56484 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccr8P56484 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr8P56484 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.05■□□□□ 0.96
Ccr8P56484 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr8P56484 Gm9397-201ENSMUST00000200125 605 ntBASIC21.03■□□□□ 0.96
Ccr8P56484 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr8P56484 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr8P56484 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ccr8P56484 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr8P56484 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr8P56484 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr8P56484 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21■□□□□ 0.95
Ccr8P56484 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21■□□□□ 0.95
Ccr8P56484 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccr8P56484 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr8P56484 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr8P56484 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccr8P56484 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccr8P56484 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.99■□□□□ 0.95
Ccr8P56484 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr8P56484 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr8P56484 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr8P56484 Gm45855-201ENSMUST00000212546 880 ntBASIC20.97■□□□□ 0.95
Ccr8P56484 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr8P56484 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr8P56484 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccr8P56484 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr8P56484 Gm24970-201ENSMUST00000175582 82 ntBASIC20.95■□□□□ 0.94
Ccr8P56484 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccr8P56484 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccr8P56484 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr8P56484 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr8P56484 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr8P56484 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr8P56484 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Ccr8P56484 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccr8P56484 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr8P56484 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr8P56484 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr8P56484 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr8P56484 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ccr8P56484 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr8P56484 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr8P56484 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccr8P56484 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.9■□□□□ 0.94
Ccr8P56484 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr8P56484 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccr8P56484 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr8P56484 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccr8P56484 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr8P56484 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr8P56484 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Ccr8P56484 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccr8P56484 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms