Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab4aP56371 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab4aP56371 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab4aP56371 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab4aP56371 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rab4aP56371 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab4aP56371 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab4aP56371 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rab4aP56371 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab4aP56371 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab4aP56371 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rab4aP56371 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab4aP56371 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab4aP56371 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab4aP56371 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rab4aP56371 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab4aP56371 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rab4aP56371 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rab4aP56371 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rab4aP56371 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Rab4aP56371 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab4aP56371 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rab4aP56371 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab4aP56371 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rab4aP56371 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab4aP56371 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab4aP56371 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rab4aP56371 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab4aP56371 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rab4aP56371 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab4aP56371 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab4aP56371 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab4aP56371 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rab4aP56371 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rab4aP56371 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab4aP56371 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rab4aP56371 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab4aP56371 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab4aP56371 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab4aP56371 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab4aP56371 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rab4aP56371 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab4aP56371 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab4aP56371 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.19■□□□□ 0.66
Rab4aP56371 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab4aP56371 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab4aP56371 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab4aP56371 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab4aP56371 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rab4aP56371 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Rab4aP56371 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab4aP56371 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab4aP56371 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab4aP56371 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab4aP56371 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rab4aP56371 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab4aP56371 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab4aP56371 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab4aP56371 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab4aP56371 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rab4aP56371 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab4aP56371 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Rab4aP56371 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab4aP56371 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Rab4aP56371 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab4aP56371 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rab4aP56371 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab4aP56371 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rab4aP56371 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab4aP56371 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab4aP56371 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rab4aP56371 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab4aP56371 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab4aP56371 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.12■□□□□ 0.65
Rab4aP56371 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.12■□□□□ 0.65
Rab4aP56371 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rab4aP56371 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab4aP56371 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab4aP56371 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab4aP56371 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab4aP56371 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Rab4aP56371 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rab4aP56371 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab4aP56371 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Rab4aP56371 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab4aP56371 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab4aP56371 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab4aP56371 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.06■□□□□ 0.64
Rab4aP56371 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab4aP56371 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab4aP56371 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab4aP56371 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rab4aP56371 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab4aP56371 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab4aP56371 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.04■□□□□ 0.64
Rab4aP56371 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab4aP56371 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab4aP56371 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab4aP56371 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab4aP56371 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms