Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Msh6P54276 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.39■■■□□ 2.78
Msh6P54276 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Msh6P54276 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Msh6P54276 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
Msh6P54276 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
Msh6P54276 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Msh6P54276 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.35■■■□□ 2.77
Msh6P54276 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Msh6P54276 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Msh6P54276 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Msh6P54276 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Msh6P54276 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.32■■■□□ 2.76
Msh6P54276 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Msh6P54276 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Msh6P54276 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Msh6P54276 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
Msh6P54276 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Msh6P54276 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Msh6P54276 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
Msh6P54276 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Msh6P54276 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Msh6P54276 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Msh6P54276 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Msh6P54276 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
Msh6P54276 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Msh6P54276 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.21■■■□□ 2.75
Msh6P54276 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Msh6P54276 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Msh6P54276 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.2■■■□□ 2.74
Msh6P54276 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.19■■■□□ 2.74
Msh6P54276 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Msh6P54276 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Msh6P54276 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.16■■■□□ 2.74
Msh6P54276 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Msh6P54276 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
Msh6P54276 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Msh6P54276 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.14■■■□□ 2.74
Msh6P54276 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Msh6P54276 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Msh6P54276 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Msh6P54276 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC32.09■■■□□ 2.73
Msh6P54276 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Msh6P54276 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Msh6P54276 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Msh6P54276 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.07■■■□□ 2.73
Msh6P54276 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Msh6P54276 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Msh6P54276 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Msh6P54276 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.07■■■□□ 2.72
Msh6P54276 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Msh6P54276 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.06■■■□□ 2.72
Msh6P54276 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Msh6P54276 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.06■■■□□ 2.72
Msh6P54276 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Msh6P54276 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Msh6P54276 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.04■■■□□ 2.72
Msh6P54276 Nkain2-201ENSMUST00000092602 558 ntBASIC32.04■■■□□ 2.72
Msh6P54276 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Msh6P54276 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Msh6P54276 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Msh6P54276 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Msh6P54276 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Msh6P54276 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
Msh6P54276 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Msh6P54276 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
Msh6P54276 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32■■■□□ 2.71
Msh6P54276 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Msh6P54276 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Msh6P54276 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Msh6P54276 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Msh6P54276 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Msh6P54276 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Msh6P54276 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
Msh6P54276 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Msh6P54276 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.94■■■□□ 2.7
Msh6P54276 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Msh6P54276 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Msh6P54276 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Msh6P54276 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Msh6P54276 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Msh6P54276 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Msh6P54276 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.9■■■□□ 2.7
Msh6P54276 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Msh6P54276 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Msh6P54276 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Msh6P54276 Gm7432-201ENSMUST00000210343 879 ntBASIC31.87■■■□□ 2.69
Msh6P54276 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Msh6P54276 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.86■■■□□ 2.69
Msh6P54276 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Msh6P54276 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Msh6P54276 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Msh6P54276 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Msh6P54276 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Msh6P54276 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Msh6P54276 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Msh6P54276 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.81■■■□□ 2.68
Msh6P54276 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Msh6P54276 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Msh6P54276 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms