Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf9P20334 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf9P20334 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf9P20334 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.74■□□□□ 0.75
Tnfrsf9P20334 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf9P20334 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.71■□□□□ 0.75
Tnfrsf9P20334 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf9P20334 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Tnfrsf9P20334 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.71■□□□□ 0.75
Tnfrsf9P20334 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf9P20334 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Tnfrsf9P20334 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf9P20334 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.7■□□□□ 0.74
Tnfrsf9P20334 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.7■□□□□ 0.74
Tnfrsf9P20334 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.7■□□□□ 0.74
Tnfrsf9P20334 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Tnfrsf9P20334 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf9P20334 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf9P20334 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf9P20334 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf9P20334 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf9P20334 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf9P20334 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.67■□□□□ 0.74
Tnfrsf9P20334 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf9P20334 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tnfrsf9P20334 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf9P20334 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf9P20334 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.64■□□□□ 0.73
Tnfrsf9P20334 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf9P20334 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf9P20334 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf9P20334 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.61■□□□□ 0.73
Tnfrsf9P20334 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf9P20334 Nkain2-201ENSMUST00000092602 558 ntBASIC19.6■□□□□ 0.73
Tnfrsf9P20334 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf9P20334 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf9P20334 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tnfrsf9P20334 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf9P20334 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.57■□□□□ 0.72
Tnfrsf9P20334 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf9P20334 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf9P20334 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf9P20334 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf9P20334 Gm7432-201ENSMUST00000210343 879 ntBASIC19.54■□□□□ 0.72
Tnfrsf9P20334 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf9P20334 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf9P20334 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tnfrsf9P20334 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnfrsf9P20334 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf9P20334 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf9P20334 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf9P20334 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf9P20334 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnfrsf9P20334 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf9P20334 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf9P20334 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.51■□□□□ 0.71
Tnfrsf9P20334 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf9P20334 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf9P20334 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf9P20334 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf9P20334 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf9P20334 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf9P20334 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf9P20334 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Tnfrsf9P20334 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf9P20334 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Tnfrsf9P20334 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf9P20334 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf9P20334 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf9P20334 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf9P20334 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf9P20334 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf9P20334 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf9P20334 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf9P20334 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf9P20334 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms