Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.82■■□□□ 1.88
Ttc3O88196 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.81■■□□□ 1.88
Ttc3O88196 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ttc3O88196 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ttc3O88196 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ttc3O88196 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ttc3O88196 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ttc3O88196 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.78■■□□□ 1.88
Ttc3O88196 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ttc3O88196 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ttc3O88196 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Ttc3O88196 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ttc3O88196 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ttc3O88196 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Ttc3O88196 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ttc3O88196 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ttc3O88196 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ttc3O88196 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ttc3O88196 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ttc3O88196 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ttc3O88196 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ttc3O88196 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.74■■□□□ 1.87
Ttc3O88196 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ttc3O88196 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.73■■□□□ 1.87
Ttc3O88196 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
Ttc3O88196 Gm8503-201ENSMUST00000118131 455 ntBASIC26.71■■□□□ 1.87
Ttc3O88196 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ttc3O88196 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ttc3O88196 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Ttc3O88196 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ttc3O88196 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ttc3O88196 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.68■■□□□ 1.86
Ttc3O88196 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.68■■□□□ 1.86
Ttc3O88196 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ttc3O88196 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Ttc3O88196 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ttc3O88196 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ttc3O88196 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ttc3O88196 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ttc3O88196 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ttc3O88196 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc3O88196 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc3O88196 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc3O88196 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc3O88196 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ttc3O88196 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ttc3O88196 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ttc3O88196 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ttc3O88196 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ttc3O88196 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Ttc3O88196 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ttc3O88196 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.55■■□□□ 1.84
Ttc3O88196 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ttc3O88196 Gm6821-201ENSMUST00000107540 542 ntBASIC26.54■■□□□ 1.84
Ttc3O88196 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc3O88196 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc3O88196 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ttc3O88196 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ttc3O88196 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.49■■□□□ 1.83
Ttc3O88196 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Ttc3O88196 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ttc3O88196 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ttc3O88196 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Ttc3O88196 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ttc3O88196 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ttc3O88196 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ttc3O88196 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.45■■□□□ 1.82
Ttc3O88196 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc3O88196 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc3O88196 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc3O88196 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ttc3O88196 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.43■■□□□ 1.82
Ttc3O88196 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.42■■□□□ 1.82
Ttc3O88196 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.42■■□□□ 1.82
Ttc3O88196 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ttc3O88196 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc3O88196 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Ttc3O88196 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc3O88196 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc3O88196 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.39■■□□□ 1.82
Ttc3O88196 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
Ttc3O88196 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc3O88196 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc3O88196 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ttc3O88196 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ttc3O88196 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.37■■□□□ 1.81
Ttc3O88196 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ttc3O88196 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.35■■□□□ 1.81
Ttc3O88196 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ttc3O88196 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
Ttc3O88196 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.34■■□□□ 1.81
Ttc3O88196 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ttc3O88196 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.32■■□□□ 1.8
Ttc3O88196 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc3O88196 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc3O88196 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc3O88196 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.31■■□□□ 1.8
Ttc3O88196 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc3O88196 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.3■■□□□ 1.8
Ttc3O88196 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms