Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Hps1O08983 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hps1O08983 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hps1O08983 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hps1O08983 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hps1O08983 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hps1O08983 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Hps1O08983 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Hps1O08983 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.36■■□□□ 1.17
Hps1O08983 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hps1O08983 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hps1O08983 Peli2-204ENSMUST00000226513 1320 ntBASIC22.35■■□□□ 1.17
Hps1O08983 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Hps1O08983 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hps1O08983 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Hps1O08983 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
Hps1O08983 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hps1O08983 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hps1O08983 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hps1O08983 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hps1O08983 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Hps1O08983 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Hps1O08983 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.3■■□□□ 1.16
Hps1O08983 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hps1O08983 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hps1O08983 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hps1O08983 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hps1O08983 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Hps1O08983 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Hps1O08983 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hps1O08983 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hps1O08983 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.26■■□□□ 1.15
Hps1O08983 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.26■■□□□ 1.15
Hps1O08983 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Hps1O08983 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Hps1O08983 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.25■■□□□ 1.15
Hps1O08983 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hps1O08983 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.24■■□□□ 1.15
Hps1O08983 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Hps1O08983 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Hps1O08983 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Hps1O08983 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Hps1O08983 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Hps1O08983 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hps1O08983 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hps1O08983 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.19■■□□□ 1.14
Hps1O08983 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Hps1O08983 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hps1O08983 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hps1O08983 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Hps1O08983 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hps1O08983 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hps1O08983 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hps1O08983 Amer2-203ENSMUST00000225247 2662 ntBASIC22.14■■□□□ 1.14
Hps1O08983 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hps1O08983 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.13■■□□□ 1.13
Hps1O08983 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Hps1O08983 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.13■■□□□ 1.13
Hps1O08983 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hps1O08983 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hps1O08983 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms