Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Hps1O08983 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Hps1O08983 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hps1O08983 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Hps1O08983 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hps1O08983 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hps1O08983 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hps1O08983 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hps1O08983 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Hps1O08983 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Hps1O08983 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.36■■□□□ 1.17
Hps1O08983 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hps1O08983 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hps1O08983 Peli2-204ENSMUST00000226513 1320 ntBASIC22.35■■□□□ 1.17
Hps1O08983 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Hps1O08983 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hps1O08983 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Hps1O08983 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
Hps1O08983 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hps1O08983 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hps1O08983 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hps1O08983 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hps1O08983 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Hps1O08983 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Hps1O08983 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hps1O08983 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.3■■□□□ 1.16
Hps1O08983 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hps1O08983 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hps1O08983 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hps1O08983 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hps1O08983 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hps1O08983 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Hps1O08983 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Hps1O08983 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hps1O08983 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hps1O08983 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.26■■□□□ 1.15
Hps1O08983 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.26■■□□□ 1.15
Hps1O08983 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Hps1O08983 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Hps1O08983 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.25■■□□□ 1.15
Hps1O08983 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hps1O08983 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.24■■□□□ 1.15
Hps1O08983 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hps1O08983 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Hps1O08983 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Hps1O08983 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Hps1O08983 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Hps1O08983 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Hps1O08983 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hps1O08983 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hps1O08983 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.19■■□□□ 1.14
Hps1O08983 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Hps1O08983 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hps1O08983 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hps1O08983 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hps1O08983 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hps1O08983 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Hps1O08983 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hps1O08983 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hps1O08983 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hps1O08983 Amer2-203ENSMUST00000225247 2662 ntBASIC22.14■■□□□ 1.14
Hps1O08983 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hps1O08983 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.13■■□□□ 1.13
Hps1O08983 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hps1O08983 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Hps1O08983 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.13■■□□□ 1.13
Hps1O08983 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hps1O08983 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hps1O08983 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hps1O08983 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hps1O08983 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms