Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cldn20G5E8X0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.38■■□□□ 1.01
Cldn20G5E8X0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.37■■□□□ 1.01
Cldn20G5E8X0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn20G5E8X0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn20G5E8X0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn20G5E8X0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn20G5E8X0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cldn20G5E8X0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn20G5E8X0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn20G5E8X0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn20G5E8X0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Cldn20G5E8X0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cldn20G5E8X0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cldn20G5E8X0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn20G5E8X0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Cldn20G5E8X0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cldn20G5E8X0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cldn20G5E8X0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn20G5E8X0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn20G5E8X0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn20G5E8X0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cldn20G5E8X0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn20G5E8X0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Gm24804-201ENSMUST00000174982 85 ntBASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn20G5E8X0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cldn20G5E8X0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cldn20G5E8X0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Cldn20G5E8X0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn20G5E8X0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn20G5E8X0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cldn20G5E8X0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn20G5E8X0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn20G5E8X0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.21■□□□□ 0.99
Cldn20G5E8X0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn20G5E8X0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn20G5E8X0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn20G5E8X0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cldn20G5E8X0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn20G5E8X0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn20G5E8X0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn20G5E8X0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cldn20G5E8X0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn20G5E8X0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cldn20G5E8X0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn20G5E8X0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn20G5E8X0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn20G5E8X0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn20G5E8X0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Cldn20G5E8X0 Peli2-204ENSMUST00000226513 1320 ntBASIC21.12■□□□□ 0.97
Cldn20G5E8X0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn20G5E8X0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn20G5E8X0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn20G5E8X0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cldn20G5E8X0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn20G5E8X0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.09■□□□□ 0.97
Cldn20G5E8X0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn20G5E8X0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn20G5E8X0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cldn20G5E8X0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn20G5E8X0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn20G5E8X0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cldn20G5E8X0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.06■□□□□ 0.96
Cldn20G5E8X0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn20G5E8X0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.05■□□□□ 0.96
Cldn20G5E8X0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.04■□□□□ 0.96
Cldn20G5E8X0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn20G5E8X0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn20G5E8X0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn20G5E8X0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn20G5E8X0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cldn20G5E8X0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn20G5E8X0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn20G5E8X0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn20G5E8X0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn20G5E8X0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn20G5E8X0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn20G5E8X0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn20G5E8X0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn20G5E8X0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn20G5E8X0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn20G5E8X0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn20G5E8X0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn20G5E8X0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Cldn20G5E8X0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms