Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ScaperF8VQ70 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.86■■■□□ 2.69
ScaperF8VQ70 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
ScaperF8VQ70 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ScaperF8VQ70 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ScaperF8VQ70 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.85■■■□□ 2.69
ScaperF8VQ70 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ScaperF8VQ70 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
ScaperF8VQ70 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ScaperF8VQ70 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
ScaperF8VQ70 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.82■■■□□ 2.69
ScaperF8VQ70 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ScaperF8VQ70 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ScaperF8VQ70 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.79■■■□□ 2.68
ScaperF8VQ70 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.79■■■□□ 2.68
ScaperF8VQ70 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
ScaperF8VQ70 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
ScaperF8VQ70 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
ScaperF8VQ70 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
ScaperF8VQ70 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
ScaperF8VQ70 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ScaperF8VQ70 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ScaperF8VQ70 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ScaperF8VQ70 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
ScaperF8VQ70 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.73■■■□□ 2.67
ScaperF8VQ70 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ScaperF8VQ70 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ScaperF8VQ70 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ScaperF8VQ70 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ScaperF8VQ70 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.71■■■□□ 2.67
ScaperF8VQ70 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.71■■■□□ 2.67
ScaperF8VQ70 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.71■■■□□ 2.67
ScaperF8VQ70 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ScaperF8VQ70 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ScaperF8VQ70 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ScaperF8VQ70 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.69■■■□□ 2.66
ScaperF8VQ70 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ScaperF8VQ70 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ScaperF8VQ70 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ScaperF8VQ70 Gm7432-201ENSMUST00000210343 879 ntBASIC31.67■■■□□ 2.66
ScaperF8VQ70 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
ScaperF8VQ70 Nkain2-201ENSMUST00000092602 558 ntBASIC31.67■■■□□ 2.66
ScaperF8VQ70 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.66■■■□□ 2.66
ScaperF8VQ70 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ScaperF8VQ70 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ScaperF8VQ70 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ScaperF8VQ70 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ScaperF8VQ70 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
ScaperF8VQ70 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ScaperF8VQ70 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ScaperF8VQ70 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.6■■■□□ 2.65
ScaperF8VQ70 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ScaperF8VQ70 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ScaperF8VQ70 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ScaperF8VQ70 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ScaperF8VQ70 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.56■■■□□ 2.64
ScaperF8VQ70 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ScaperF8VQ70 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.55■■■□□ 2.64
ScaperF8VQ70 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.54■■■□□ 2.64
ScaperF8VQ70 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.54■■■□□ 2.64
ScaperF8VQ70 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
ScaperF8VQ70 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ScaperF8VQ70 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ScaperF8VQ70 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.5■■■□□ 2.63
ScaperF8VQ70 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ScaperF8VQ70 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
ScaperF8VQ70 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.49■■■□□ 2.63
ScaperF8VQ70 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ScaperF8VQ70 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
ScaperF8VQ70 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ScaperF8VQ70 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ScaperF8VQ70 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ScaperF8VQ70 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.45■■■□□ 2.63
ScaperF8VQ70 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ScaperF8VQ70 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
ScaperF8VQ70 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
ScaperF8VQ70 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ScaperF8VQ70 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ScaperF8VQ70 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ScaperF8VQ70 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ScaperF8VQ70 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ScaperF8VQ70 Gm11599-201ENSMUST00000118720 878 ntBASIC31.43■■■□□ 2.62
ScaperF8VQ70 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
ScaperF8VQ70 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.42■■■□□ 2.62
ScaperF8VQ70 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ScaperF8VQ70 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ScaperF8VQ70 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ScaperF8VQ70 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ScaperF8VQ70 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
ScaperF8VQ70 Mir6538-201ENSMUST00000183713 110 ntBASIC31.37■■■□□ 2.61
ScaperF8VQ70 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ScaperF8VQ70 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.35■■■□□ 2.61
ScaperF8VQ70 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
ScaperF8VQ70 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.34■■■□□ 2.61
ScaperF8VQ70 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms