Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cacna1iE9Q7P2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1iE9Q7P2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.39■□□□□ 0.85
Cacna1iE9Q7P2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1iE9Q7P2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1iE9Q7P2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1iE9Q7P2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1iE9Q7P2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cacna1iE9Q7P2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1iE9Q7P2 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.37■□□□□ 0.85
Cacna1iE9Q7P2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Cacna1iE9Q7P2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1iE9Q7P2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cacna1iE9Q7P2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.33■□□□□ 0.85
Cacna1iE9Q7P2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.33■□□□□ 0.85
Cacna1iE9Q7P2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Cacna1iE9Q7P2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.32■□□□□ 0.84
Cacna1iE9Q7P2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1iE9Q7P2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cacna1iE9Q7P2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.31■□□□□ 0.84
Cacna1iE9Q7P2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cacna1iE9Q7P2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1iE9Q7P2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cacna1iE9Q7P2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cacna1iE9Q7P2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacna1iE9Q7P2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1iE9Q7P2 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.26■□□□□ 0.83
Cacna1iE9Q7P2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1iE9Q7P2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1iE9Q7P2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1iE9Q7P2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cacna1iE9Q7P2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cacna1iE9Q7P2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1iE9Q7P2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1iE9Q7P2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cacna1iE9Q7P2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1iE9Q7P2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.23■□□□□ 0.83
Cacna1iE9Q7P2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1iE9Q7P2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cacna1iE9Q7P2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1iE9Q7P2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cacna1iE9Q7P2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1iE9Q7P2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1iE9Q7P2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cacna1iE9Q7P2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cacna1iE9Q7P2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.18■□□□□ 0.82
Cacna1iE9Q7P2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1iE9Q7P2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.17■□□□□ 0.82
Cacna1iE9Q7P2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1iE9Q7P2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1iE9Q7P2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cacna1iE9Q7P2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1iE9Q7P2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1iE9Q7P2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1iE9Q7P2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1iE9Q7P2 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.11■□□□□ 0.81
Cacna1iE9Q7P2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1iE9Q7P2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1iE9Q7P2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cacna1iE9Q7P2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1iE9Q7P2 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.1■□□□□ 0.81
Cacna1iE9Q7P2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1iE9Q7P2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cacna1iE9Q7P2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.08■□□□□ 0.81
Cacna1iE9Q7P2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.08■□□□□ 0.81
Cacna1iE9Q7P2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cacna1iE9Q7P2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cacna1iE9Q7P2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cacna1iE9Q7P2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1iE9Q7P2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cacna1iE9Q7P2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1iE9Q7P2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cacna1iE9Q7P2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1iE9Q7P2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.05■□□□□ 0.8
Cacna1iE9Q7P2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cacna1iE9Q7P2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cacna1iE9Q7P2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1iE9Q7P2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1iE9Q7P2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cacna1iE9Q7P2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1iE9Q7P2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1iE9Q7P2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1iE9Q7P2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1iE9Q7P2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1iE9Q7P2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1iE9Q7P2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1iE9Q7P2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1iE9Q7P2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms