Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.27■□□□□ 0.68
Ccdc71lE9Q4T4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc71lE9Q4T4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.26■□□□□ 0.67
Ccdc71lE9Q4T4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc71lE9Q4T4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Ccdc71lE9Q4T4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc71lE9Q4T4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc71lE9Q4T4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc71lE9Q4T4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc71lE9Q4T4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc71lE9Q4T4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc71lE9Q4T4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc71lE9Q4T4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc71lE9Q4T4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc71lE9Q4T4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc71lE9Q4T4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc71lE9Q4T4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc71lE9Q4T4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc71lE9Q4T4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc71lE9Q4T4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc71lE9Q4T4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc71lE9Q4T4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc71lE9Q4T4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc71lE9Q4T4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ccdc71lE9Q4T4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc71lE9Q4T4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc71lE9Q4T4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc71lE9Q4T4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc71lE9Q4T4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc71lE9Q4T4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc71lE9Q4T4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc71lE9Q4T4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc71lE9Q4T4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc71lE9Q4T4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc71lE9Q4T4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc71lE9Q4T4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc71lE9Q4T4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc71lE9Q4T4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc71lE9Q4T4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc71lE9Q4T4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc71lE9Q4T4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc71lE9Q4T4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc71lE9Q4T4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc71lE9Q4T4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc71lE9Q4T4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc71lE9Q4T4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc71lE9Q4T4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc71lE9Q4T4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc71lE9Q4T4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc71lE9Q4T4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccdc71lE9Q4T4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc71lE9Q4T4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc71lE9Q4T4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc71lE9Q4T4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc71lE9Q4T4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc71lE9Q4T4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc71lE9Q4T4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.02■□□□□ 0.64
Ccdc71lE9Q4T4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc71lE9Q4T4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc71lE9Q4T4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc71lE9Q4T4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc71lE9Q4T4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc71lE9Q4T4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc71lE9Q4T4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc71lE9Q4T4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc71lE9Q4T4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc71lE9Q4T4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc71lE9Q4T4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc71lE9Q4T4 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.97■□□□□ 0.63
Ccdc71lE9Q4T4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc71lE9Q4T4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc71lE9Q4T4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc71lE9Q4T4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc71lE9Q4T4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc71lE9Q4T4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms