Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col6a3E9PWQ3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Col6a3E9PWQ3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.42■■□□□ 1.82
Col6a3E9PWQ3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col6a3E9PWQ3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col6a3E9PWQ3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col6a3E9PWQ3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col6a3E9PWQ3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Col6a3E9PWQ3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col6a3E9PWQ3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.38■■□□□ 1.81
Col6a3E9PWQ3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.38■■□□□ 1.81
Col6a3E9PWQ3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.36■■□□□ 1.81
Col6a3E9PWQ3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Col6a3E9PWQ3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col6a3E9PWQ3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Col6a3E9PWQ3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.34■■□□□ 1.81
Col6a3E9PWQ3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col6a3E9PWQ3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col6a3E9PWQ3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col6a3E9PWQ3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col6a3E9PWQ3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col6a3E9PWQ3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col6a3E9PWQ3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col6a3E9PWQ3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col6a3E9PWQ3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col6a3E9PWQ3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.28■■□□□ 1.8
Col6a3E9PWQ3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Col6a3E9PWQ3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.26■■□□□ 1.79
Col6a3E9PWQ3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col6a3E9PWQ3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.22■■□□□ 1.79
Col6a3E9PWQ3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Col6a3E9PWQ3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
Col6a3E9PWQ3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Col6a3E9PWQ3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col6a3E9PWQ3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col6a3E9PWQ3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.17■■□□□ 1.78
Col6a3E9PWQ3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col6a3E9PWQ3 Gm6311-201ENSMUST00000073790 878 ntBASIC26.15■■□□□ 1.78
Col6a3E9PWQ3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Col6a3E9PWQ3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Col6a3E9PWQ3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col6a3E9PWQ3 Gm5812-201ENSMUST00000061073 957 ntBASIC26.12■■□□□ 1.77
Col6a3E9PWQ3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col6a3E9PWQ3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col6a3E9PWQ3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Col6a3E9PWQ3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.1■■□□□ 1.77
Col6a3E9PWQ3 Gm12366-201ENSMUST00000121722 873 ntBASIC26.1■■□□□ 1.77
Col6a3E9PWQ3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.1■■□□□ 1.77
Col6a3E9PWQ3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.1■■□□□ 1.77
Col6a3E9PWQ3 Gm5786-201ENSMUST00000085368 882 ntBASIC26.1■■□□□ 1.77
Col6a3E9PWQ3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 Gm5297-201ENSMUST00000198555 1171 ntBASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.09■■□□□ 1.77
Col6a3E9PWQ3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Col6a3E9PWQ3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
Col6a3E9PWQ3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col6a3E9PWQ3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.04■■□□□ 1.76
Col6a3E9PWQ3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Col6a3E9PWQ3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Col6a3E9PWQ3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Col6a3E9PWQ3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
Col6a3E9PWQ3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Col6a3E9PWQ3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Col6a3E9PWQ3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Col6a3E9PWQ3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Col6a3E9PWQ3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.96■■□□□ 1.75
Col6a3E9PWQ3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col6a3E9PWQ3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.96■■□□□ 1.75
Col6a3E9PWQ3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.95■■□□□ 1.74
Col6a3E9PWQ3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.95■■□□□ 1.74
Col6a3E9PWQ3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Col6a3E9PWQ3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col6a3E9PWQ3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col6a3E9PWQ3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.9■■□□□ 1.74
Col6a3E9PWQ3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col6a3E9PWQ3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col6a3E9PWQ3 Gm4799-201ENSMUST00000095396 657 ntBASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col6a3E9PWQ3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col6a3E9PWQ3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col6a3E9PWQ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col6a3E9PWQ3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.84■■□□□ 1.73
Col6a3E9PWQ3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.83■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms