Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp27D3YV89 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp27D3YV89 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp27D3YV89 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.51■□□□□ 0.87
Mmp27D3YV89 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp27D3YV89 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Mmp27D3YV89 Peli2-204ENSMUST00000226513 1320 ntBASIC20.5■□□□□ 0.87
Mmp27D3YV89 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Mmp27D3YV89 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Mmp27D3YV89 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp27D3YV89 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp27D3YV89 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp27D3YV89 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp27D3YV89 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp27D3YV89 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp27D3YV89 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp27D3YV89 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Mmp27D3YV89 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp27D3YV89 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.46■□□□□ 0.87
Mmp27D3YV89 Gm16148-201ENSMUST00000119653 893 ntBASIC20.46■□□□□ 0.87
Mmp27D3YV89 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp27D3YV89 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Mmp27D3YV89 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp27D3YV89 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Mmp27D3YV89 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp27D3YV89 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp27D3YV89 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Mmp27D3YV89 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp27D3YV89 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp27D3YV89 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp27D3YV89 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp27D3YV89 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp27D3YV89 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp27D3YV89 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Mmp27D3YV89 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp27D3YV89 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Mmp27D3YV89 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp27D3YV89 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp27D3YV89 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp27D3YV89 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp27D3YV89 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp27D3YV89 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.37■□□□□ 0.85
Mmp27D3YV89 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp27D3YV89 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp27D3YV89 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp27D3YV89 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp27D3YV89 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.36■□□□□ 0.85
Mmp27D3YV89 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Mmp27D3YV89 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp27D3YV89 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp27D3YV89 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp27D3YV89 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp27D3YV89 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mmp27D3YV89 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp27D3YV89 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp27D3YV89 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp27D3YV89 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp27D3YV89 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp27D3YV89 Zfp131-205ENSMUST00000223812 663 ntBASIC20.32■□□□□ 0.84
Mmp27D3YV89 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp27D3YV89 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp27D3YV89 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp27D3YV89 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp27D3YV89 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp27D3YV89 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp27D3YV89 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp27D3YV89 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Mmp27D3YV89 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp27D3YV89 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp27D3YV89 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp27D3YV89 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Mmp27D3YV89 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp27D3YV89 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mmp27D3YV89 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp27D3YV89 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp27D3YV89 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp27D3YV89 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp27D3YV89 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp27D3YV89 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp27D3YV89 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp27D3YV89 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp27D3YV89 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp27D3YV89 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp27D3YV89 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp27D3YV89 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.21■□□□□ 0.83
Mmp27D3YV89 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.21■□□□□ 0.83
Mmp27D3YV89 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp27D3YV89 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp27D3YV89 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp27D3YV89 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Mmp27D3YV89 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp27D3YV89 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Mmp27D3YV89 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp27D3YV89 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp27D3YV89 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms