Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ptchd4B9EKX1 Gm8503-201ENSMUST00000118131 455 ntBASIC27.3■■□□□ 1.96
Ptchd4B9EKX1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ptchd4B9EKX1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptchd4B9EKX1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptchd4B9EKX1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Ptchd4B9EKX1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ptchd4B9EKX1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
Ptchd4B9EKX1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptchd4B9EKX1 Gm6821-201ENSMUST00000107540 542 ntBASIC27.25■■□□□ 1.95
Ptchd4B9EKX1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptchd4B9EKX1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptchd4B9EKX1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ptchd4B9EKX1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptchd4B9EKX1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.23■■□□□ 1.95
Ptchd4B9EKX1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ptchd4B9EKX1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.22■■□□□ 1.95
Ptchd4B9EKX1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ptchd4B9EKX1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.21■■□□□ 1.95
Ptchd4B9EKX1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ptchd4B9EKX1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ptchd4B9EKX1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.2■■□□□ 1.94
Ptchd4B9EKX1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ptchd4B9EKX1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ptchd4B9EKX1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptchd4B9EKX1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptchd4B9EKX1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.16■■□□□ 1.94
Ptchd4B9EKX1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ptchd4B9EKX1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Ptchd4B9EKX1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Ptchd4B9EKX1 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.13■■□□□ 1.93
Ptchd4B9EKX1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptchd4B9EKX1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptchd4B9EKX1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ptchd4B9EKX1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ptchd4B9EKX1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ptchd4B9EKX1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ptchd4B9EKX1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptchd4B9EKX1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptchd4B9EKX1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ptchd4B9EKX1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.09■■□□□ 1.93
Ptchd4B9EKX1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ptchd4B9EKX1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ptchd4B9EKX1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ptchd4B9EKX1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ptchd4B9EKX1 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.04■■□□□ 1.92
Ptchd4B9EKX1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ptchd4B9EKX1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ptchd4B9EKX1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ptchd4B9EKX1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27■■□□□ 1.91
Ptchd4B9EKX1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ptchd4B9EKX1 Nkain2-201ENSMUST00000092602 558 ntBASIC26.99■■□□□ 1.91
Ptchd4B9EKX1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ptchd4B9EKX1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.98■■□□□ 1.91
Ptchd4B9EKX1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ptchd4B9EKX1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.97■■□□□ 1.91
Ptchd4B9EKX1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ptchd4B9EKX1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ptchd4B9EKX1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ptchd4B9EKX1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ptchd4B9EKX1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ptchd4B9EKX1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ptchd4B9EKX1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ptchd4B9EKX1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptchd4B9EKX1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptchd4B9EKX1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.94■■□□□ 1.9
Ptchd4B9EKX1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.94■■□□□ 1.9
Ptchd4B9EKX1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ptchd4B9EKX1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptchd4B9EKX1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
Ptchd4B9EKX1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
Ptchd4B9EKX1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Ptchd4B9EKX1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.91■■□□□ 1.9
Ptchd4B9EKX1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.9■■□□□ 1.9
Ptchd4B9EKX1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
Ptchd4B9EKX1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptchd4B9EKX1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ptchd4B9EKX1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptchd4B9EKX1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ptchd4B9EKX1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ptchd4B9EKX1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ptchd4B9EKX1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ptchd4B9EKX1 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.85■■□□□ 1.89
Ptchd4B9EKX1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptchd4B9EKX1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ptchd4B9EKX1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ptchd4B9EKX1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.81■■□□□ 1.88
Ptchd4B9EKX1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ptchd4B9EKX1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ptchd4B9EKX1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Ptchd4B9EKX1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ptchd4B9EKX1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.76■■□□□ 1.87
Ptchd4B9EKX1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ptchd4B9EKX1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ptchd4B9EKX1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ptchd4B9EKX1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
Ptchd4B9EKX1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ptchd4B9EKX1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Ptchd4B9EKX1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.73■■□□□ 1.87
Ptchd4B9EKX1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms