Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
Shroom2A2ALU4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
Shroom2A2ALU4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC41.49■■■■■ 4.23
Shroom2A2ALU4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC41.48■■■■■ 4.23
Shroom2A2ALU4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC41.48■■■■■ 4.23
Shroom2A2ALU4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
Shroom2A2ALU4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Shroom2A2ALU4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC41.44■■■■■ 4.22
Shroom2A2ALU4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC41.43■■■■■ 4.22
Shroom2A2ALU4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC41.41■■■■■ 4.22
Shroom2A2ALU4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC41.38■■■■■ 4.22
Shroom2A2ALU4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC41.38■■■■■ 4.21
Shroom2A2ALU4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC41.37■■■■■ 4.21
Shroom2A2ALU4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC41.37■■■■■ 4.21
Shroom2A2ALU4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
Shroom2A2ALU4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
Shroom2A2ALU4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC41.34■■■■■ 4.21
Shroom2A2ALU4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC41.33■■■■■ 4.21
Shroom2A2ALU4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
Shroom2A2ALU4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
Shroom2A2ALU4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
Shroom2A2ALU4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
Shroom2A2ALU4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC41.27■■■■■ 4.2
Shroom2A2ALU4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Shroom2A2ALU4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC41.23■■■■■ 4.19
Shroom2A2ALU4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC41.21■■■■■ 4.19
Shroom2A2ALU4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
Shroom2A2ALU4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Shroom2A2ALU4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC41.18■■■■■ 4.18
Shroom2A2ALU4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Shroom2A2ALU4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC41.17■■■■■ 4.18
Shroom2A2ALU4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC41.17■■■■■ 4.18
Shroom2A2ALU4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC41.16■■■■■ 4.18
Shroom2A2ALU4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC41.15■■■■■ 4.18
Shroom2A2ALU4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC41.15■■■■■ 4.18
Shroom2A2ALU4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC41.15■■■■■ 4.18
Shroom2A2ALU4 Gm22567-201ENSMUST00000175542 342 ntBASIC41.14■■■■■ 4.18
Shroom2A2ALU4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC41.1■■■■■ 4.17
Shroom2A2ALU4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
Shroom2A2ALU4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC41.09■■■■■ 4.17
Shroom2A2ALU4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC41.09■■■■■ 4.17
Shroom2A2ALU4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC41.07■■■■■ 4.16
Shroom2A2ALU4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
Shroom2A2ALU4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC41.05■■■■■ 4.16
Shroom2A2ALU4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC41.05■■■■■ 4.16
Shroom2A2ALU4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Shroom2A2ALU4 Gm6311-201ENSMUST00000073790 878 ntBASIC41.04■■■■■ 4.16
Shroom2A2ALU4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Shroom2A2ALU4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC41.02■■■■■ 4.16
Shroom2A2ALU4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC41.02■■■■■ 4.16
Shroom2A2ALU4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC41.01■■■■■ 4.15
Shroom2A2ALU4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
Shroom2A2ALU4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC40.99■■■■■ 4.15
Shroom2A2ALU4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC40.99■■■■■ 4.15
Shroom2A2ALU4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Shroom2A2ALU4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
Shroom2A2ALU4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
Shroom2A2ALU4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC40.97■■■■■ 4.15
Shroom2A2ALU4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC40.97■■■■■ 4.15
Shroom2A2ALU4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC40.97■■■■■ 4.15
Shroom2A2ALU4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
Shroom2A2ALU4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
Shroom2A2ALU4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC40.96■■■■■ 4.15
Shroom2A2ALU4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC40.96■■■■■ 4.15
Shroom2A2ALU4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
Shroom2A2ALU4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
Shroom2A2ALU4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
Shroom2A2ALU4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC40.93■■■■■ 4.14
Shroom2A2ALU4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Shroom2A2ALU4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Shroom2A2ALU4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
Shroom2A2ALU4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC40.9■■■■■ 4.14
Shroom2A2ALU4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC40.9■■■■■ 4.14
Shroom2A2ALU4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
Shroom2A2ALU4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC40.89■■■■■ 4.14
Shroom2A2ALU4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
Shroom2A2ALU4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC40.88■■■■■ 4.14
Shroom2A2ALU4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC40.88■■■■■ 4.13
Shroom2A2ALU4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
Shroom2A2ALU4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Shroom2A2ALU4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Gm12366-201ENSMUST00000121722 873 ntBASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Gm5786-201ENSMUST00000085368 882 ntBASIC40.86■■■■■ 4.13
Shroom2A2ALU4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
Shroom2A2ALU4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC40.83■■■■■ 4.13
Shroom2A2ALU4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC40.77■■■■■ 4.12
Shroom2A2ALU4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC40.77■■■■■ 4.12
Shroom2A2ALU4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC40.76■■■■■ 4.12
Shroom2A2ALU4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Shroom2A2ALU4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC40.75■■■■■ 4.11
Shroom2A2ALU4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC40.74■■■■■ 4.11
Shroom2A2ALU4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
Shroom2A2ALU4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC40.74■■■■■ 4.11
Shroom2A2ALU4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC40.73■■■■■ 4.11
Shroom2A2ALU4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC40.73■■■■■ 4.11
Shroom2A2ALU4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Shroom2A2ALU4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms