Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv3-3A0A140T8Q0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-3A0A140T8Q0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-3A0A140T8Q0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv3-3A0A140T8Q0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Igkv3-3A0A140T8Q0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Igkv3-3A0A140T8Q0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Igkv3-3A0A140T8Q0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igkv3-3A0A140T8Q0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv3-3A0A140T8Q0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Igkv3-3A0A140T8Q0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Igkv3-3A0A140T8Q0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv3-3A0A140T8Q0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-3A0A140T8Q0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-3A0A140T8Q0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC14.82□□□□□ -0.04
Igkv3-3A0A140T8Q0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-3A0A140T8Q0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-3A0A140T8Q0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-3A0A140T8Q0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-3A0A140T8Q0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-3A0A140T8Q0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-3A0A140T8Q0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-3A0A140T8Q0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Igkv3-3A0A140T8Q0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-3A0A140T8Q0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-3A0A140T8Q0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-3A0A140T8Q0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-3A0A140T8Q0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-3A0A140T8Q0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-3A0A140T8Q0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-3A0A140T8Q0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Gm43445-201ENSMUST00000198564 2091 ntBASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-3A0A140T8Q0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-3A0A140T8Q0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Igkv3-3A0A140T8Q0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-3A0A140T8Q0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-3A0A140T8Q0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-3A0A140T8Q0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-3A0A140T8Q0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-3A0A140T8Q0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Igkv3-3A0A140T8Q0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-3A0A140T8Q0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-3A0A140T8Q0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.73□□□□□ -0.05
Igkv3-3A0A140T8Q0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-3A0A140T8Q0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-3A0A140T8Q0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-3A0A140T8Q0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-3A0A140T8Q0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-3A0A140T8Q0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Igkv3-3A0A140T8Q0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-3A0A140T8Q0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-3A0A140T8Q0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv3-3A0A140T8Q0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-3A0A140T8Q0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-3A0A140T8Q0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-3A0A140T8Q0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Igkv3-3A0A140T8Q0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-3A0A140T8Q0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-3A0A140T8Q0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-3A0A140T8Q0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Igkv3-3A0A140T8Q0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC14.67□□□□□ -0.06
Igkv3-3A0A140T8Q0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Igkv3-3A0A140T8Q0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Igkv3-3A0A140T8Q0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Igkv3-3A0A140T8Q0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Igkv3-3A0A140T8Q0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-3A0A140T8Q0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-3A0A140T8Q0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-3A0A140T8Q0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-3A0A140T8Q0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv3-3A0A140T8Q0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Igkv3-3A0A140T8Q0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-3A0A140T8Q0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-3A0A140T8Q0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-3A0A140T8Q0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv3-3A0A140T8Q0 AL845457.1-201ENSMUST00000197244 68 ntBASIC14.62□□□□□ -0.07
Igkv3-3A0A140T8Q0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv3-3A0A140T8Q0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Igkv3-3A0A140T8Q0 Mipep-204ENSMUST00000225043 1548 ntBASIC14.61□□□□□ -0.07
Igkv3-3A0A140T8Q0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-3A0A140T8Q0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-3A0A140T8Q0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-3A0A140T8Q0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Igkv3-3A0A140T8Q0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-3A0A140T8Q0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms