Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Atg4a-psA0A0G2JFS9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Atg4a-psA0A0G2JFS9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.56■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.56■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.55■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Atg4a-psA0A0G2JFS9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.53■■■□□ 2.48
Atg4a-psA0A0G2JFS9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.53■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Atg4a-psA0A0G2JFS9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Atg4a-psA0A0G2JFS9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.49■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
Atg4a-psA0A0G2JFS9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.48■■■□□ 2.47
Atg4a-psA0A0G2JFS9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.46■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.45■■■□□ 2.47
Atg4a-psA0A0G2JFS9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.45■■■□□ 2.46
Atg4a-psA0A0G2JFS9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.44■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Atg4a-psA0A0G2JFS9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.44■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atg4a-psA0A0G2JFS9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.41■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Amer2-203ENSMUST00000225247 2662 ntBASIC30.4■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Atg4a-psA0A0G2JFS9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Gm9397-201ENSMUST00000200125 605 ntBASIC30.35■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.35■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Atg4a-psA0A0G2JFS9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.29■■■□□ 2.44
Atg4a-psA0A0G2JFS9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.28■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Atg4a-psA0A0G2JFS9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Atg4a-psA0A0G2JFS9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.21■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.21■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Atg4a-psA0A0G2JFS9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.19■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.18■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Gm45855-201ENSMUST00000212546 880 ntBASIC30.16■■■□□ 2.42
Atg4a-psA0A0G2JFS9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Gm24970-201ENSMUST00000175582 82 ntBASIC30.15■■■□□ 2.42
Atg4a-psA0A0G2JFS9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.15■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Atg4a-psA0A0G2JFS9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30.14■■■□□ 2.42
Atg4a-psA0A0G2JFS9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.12■■■□□ 2.41
Atg4a-psA0A0G2JFS9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Atg4a-psA0A0G2JFS9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Atg4a-psA0A0G2JFS9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Atg4a-psA0A0G2JFS9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Atg4a-psA0A0G2JFS9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms