Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.16■□□□□ 0.82
Ighv1-20A0A0A6YX66 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv1-20A0A0A6YX66 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.16■□□□□ 0.82
Ighv1-20A0A0A6YX66 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-20A0A0A6YX66 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-20A0A0A6YX66 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-20A0A0A6YX66 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-20A0A0A6YX66 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-20A0A0A6YX66 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-20A0A0A6YX66 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv1-20A0A0A6YX66 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-20A0A0A6YX66 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-20A0A0A6YX66 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-20A0A0A6YX66 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ighv1-20A0A0A6YX66 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-20A0A0A6YX66 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-20A0A0A6YX66 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv1-20A0A0A6YX66 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.09■□□□□ 0.81
Ighv1-20A0A0A6YX66 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Ighv1-20A0A0A6YX66 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Ighv1-20A0A0A6YX66 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv1-20A0A0A6YX66 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-20A0A0A6YX66 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-20A0A0A6YX66 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-20A0A0A6YX66 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ighv1-20A0A0A6YX66 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.05■□□□□ 0.8
Ighv1-20A0A0A6YX66 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.04■□□□□ 0.8
Ighv1-20A0A0A6YX66 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-20A0A0A6YX66 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-20A0A0A6YX66 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv1-20A0A0A6YX66 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.02■□□□□ 0.8
Ighv1-20A0A0A6YX66 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ighv1-20A0A0A6YX66 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-20A0A0A6YX66 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-20A0A0A6YX66 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-20A0A0A6YX66 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20■□□□□ 0.79
Ighv1-20A0A0A6YX66 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-20A0A0A6YX66 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20■□□□□ 0.79
Ighv1-20A0A0A6YX66 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-20A0A0A6YX66 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ighv1-20A0A0A6YX66 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-20A0A0A6YX66 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-20A0A0A6YX66 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-20A0A0A6YX66 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-20A0A0A6YX66 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.96■□□□□ 0.79
Ighv1-20A0A0A6YX66 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-20A0A0A6YX66 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-20A0A0A6YX66 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ighv1-20A0A0A6YX66 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-20A0A0A6YX66 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-20A0A0A6YX66 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-20A0A0A6YX66 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-20A0A0A6YX66 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-20A0A0A6YX66 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-20A0A0A6YX66 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ighv1-20A0A0A6YX66 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.91■□□□□ 0.78
Ighv1-20A0A0A6YX66 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ighv1-20A0A0A6YX66 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Ighv1-20A0A0A6YX66 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.88■□□□□ 0.77
Ighv1-20A0A0A6YX66 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ighv1-20A0A0A6YX66 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-20A0A0A6YX66 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-20A0A0A6YX66 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-20A0A0A6YX66 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.85■□□□□ 0.77
Ighv1-20A0A0A6YX66 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-20A0A0A6YX66 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-20A0A0A6YX66 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-20A0A0A6YX66 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-20A0A0A6YX66 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ighv1-20A0A0A6YX66 Gm6821-201ENSMUST00000107540 542 ntBASIC19.82■□□□□ 0.76
Ighv1-20A0A0A6YX66 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-20A0A0A6YX66 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.81■□□□□ 0.76
Ighv1-20A0A0A6YX66 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-20A0A0A6YX66 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-20A0A0A6YX66 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-20A0A0A6YX66 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-20A0A0A6YX66 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-20A0A0A6YX66 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-20A0A0A6YX66 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ighv1-20A0A0A6YX66 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-20A0A0A6YX66 Gm8503-201ENSMUST00000118131 455 ntBASIC19.77■□□□□ 0.76
Ighv1-20A0A0A6YX66 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.75■□□□□ 0.75
Ighv1-20A0A0A6YX66 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ighv1-20A0A0A6YX66 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-20A0A0A6YX66 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms