Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav16A0A075B653 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav16A0A075B653 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav16A0A075B653 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav16A0A075B653 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav16A0A075B653 Gm25262-201ENSMUST00000174934 133 ntBASIC18.88■□□□□ 0.61
Trav16A0A075B653 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.88■□□□□ 0.61
Trav16A0A075B653 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Trav16A0A075B653 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav16A0A075B653 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav16A0A075B653 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav16A0A075B653 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16A0A075B653 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav16A0A075B653 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trav16A0A075B653 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16A0A075B653 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav16A0A075B653 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav16A0A075B653 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.81■□□□□ 0.6
Trav16A0A075B653 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav16A0A075B653 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav16A0A075B653 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.79■□□□□ 0.6
Trav16A0A075B653 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16A0A075B653 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav16A0A075B653 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav16A0A075B653 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav16A0A075B653 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav16A0A075B653 Gm27322-201ENSMUST00000184007 104 ntBASIC18.73■□□□□ 0.59
Trav16A0A075B653 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav16A0A075B653 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trav16A0A075B653 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav16A0A075B653 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav16A0A075B653 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav16A0A075B653 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16A0A075B653 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav16A0A075B653 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.69■□□□□ 0.58
Trav16A0A075B653 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav16A0A075B653 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trav16A0A075B653 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav16A0A075B653 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav16A0A075B653 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trav16A0A075B653 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.63■□□□□ 0.57
Trav16A0A075B653 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16A0A075B653 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav16A0A075B653 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.62■□□□□ 0.57
Trav16A0A075B653 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16A0A075B653 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav16A0A075B653 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.61■□□□□ 0.57
Trav16A0A075B653 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.61■□□□□ 0.57
Trav16A0A075B653 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav16A0A075B653 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav16A0A075B653 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav16A0A075B653 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav16A0A075B653 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav16A0A075B653 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms