Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SynbQ8BI41 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
SynbQ8BI41 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.55■□□□□ 0.4
SynbQ8BI41 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynbQ8BI41 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynbQ8BI41 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynbQ8BI41 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynbQ8BI41 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynbQ8BI41 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.55■□□□□ 0.4
SynbQ8BI41 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SynbQ8BI41 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.54■□□□□ 0.4
SynbQ8BI41 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.54■□□□□ 0.4
SynbQ8BI41 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SynbQ8BI41 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SynbQ8BI41 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynbQ8BI41 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.53■□□□□ 0.4
SynbQ8BI41 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SynbQ8BI41 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
SynbQ8BI41 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SynbQ8BI41 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SynbQ8BI41 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynbQ8BI41 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.4
SynbQ8BI41 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SynbQ8BI41 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SynbQ8BI41 Mir7071-201ENSMUST00000184847 69 ntBASIC17.52■□□□□ 0.4
SynbQ8BI41 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.52■□□□□ 0.4
SynbQ8BI41 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SynbQ8BI41 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SynbQ8BI41 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SynbQ8BI41 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.51■□□□□ 0.39
SynbQ8BI41 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SynbQ8BI41 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynbQ8BI41 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.5■□□□□ 0.39
SynbQ8BI41 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.5■□□□□ 0.39
SynbQ8BI41 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.5■□□□□ 0.39
SynbQ8BI41 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SynbQ8BI41 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SynbQ8BI41 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SynbQ8BI41 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SynbQ8BI41 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.49■□□□□ 0.39
SynbQ8BI41 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms