Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav17A0A075B655 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.78□□□□□ -0.04
Trav17A0A075B655 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav17A0A075B655 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav17A0A075B655 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav17A0A075B655 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav17A0A075B655 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav17A0A075B655 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav17A0A075B655 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.77□□□□□ -0.05
Trav17A0A075B655 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav17A0A075B655 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.76□□□□□ -0.05
Trav17A0A075B655 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav17A0A075B655 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav17A0A075B655 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.74□□□□□ -0.05
Trav17A0A075B655 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav17A0A075B655 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Golgb1-201ENSMUST00000023534 498 ntBASIC14.74□□□□□ -0.05
Trav17A0A075B655 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms