Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Col10a1Q05306 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.18■□□□□ 0.34
Col10a1Q05306 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.18■□□□□ 0.34
Col10a1Q05306 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.18■□□□□ 0.34
Col10a1Q05306 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.18■□□□□ 0.34
Col10a1Q05306 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col10a1Q05306 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.18■□□□□ 0.34
Col10a1Q05306 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col10a1Q05306 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.17■□□□□ 0.34
Col10a1Q05306 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.17■□□□□ 0.34
Col10a1Q05306 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col10a1Q05306 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col10a1Q05306 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.16■□□□□ 0.34
Col10a1Q05306 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col10a1Q05306 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col10a1Q05306 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Col10a1Q05306 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col10a1Q05306 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.15■□□□□ 0.34
Col10a1Q05306 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.15■□□□□ 0.34
Col10a1Q05306 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.15■□□□□ 0.34
Col10a1Q05306 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.15■□□□□ 0.34
Col10a1Q05306 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.15■□□□□ 0.34
Col10a1Q05306 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col10a1Q05306 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col10a1Q05306 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.14■□□□□ 0.33
Col10a1Q05306 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.14■□□□□ 0.33
Col10a1Q05306 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col10a1Q05306 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.13■□□□□ 0.33
Col10a1Q05306 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.13■□□□□ 0.33
Col10a1Q05306 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.13■□□□□ 0.33
Col10a1Q05306 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms