Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 CEX1YOR112W 2286 nt5.04□□□□□ -1.6
MSH4P40965 PTR3YFR029W 2037 nt5.04□□□□□ -1.6
MSH4P40965 YDR320W-BYDR320W-B 138 nt5.03□□□□□ -1.6
MSH4P40965 SLX9YGR081C 633 nt5.03□□□□□ -1.6
MSH4P40965 YIP1YGR172C 747 nt5.03□□□□□ -1.6
MSH4P40965 MRPL9YGR220C 810 nt5.03□□□□□ -1.6
MSH4P40965 LRP1YHR081W 555 nt5.03□□□□□ -1.6
MSH4P40965 RPS4BYHR203C 786 nt5.03□□□□□ -1.6
MSH4P40965 YIL029CYIL029C 429 nt5.03□□□□□ -1.6
MSH4P40965 GPP1YIL053W 753 nt5.03□□□□□ -1.6
MSH4P40965 YAP5YIR018W 738 nt5.03□□□□□ -1.6
MSH4P40965 YJR128WYJR128W 360 nt5.03□□□□□ -1.6
MSH4P40965 RPS4AYJR145C 786 nt5.03□□□□□ -1.6
MSH4P40965 YLR050CYLR050C 486 nt5.03□□□□□ -1.6
MSH4P40965 YMR158W-BYMR158W-B 321 nt5.03□□□□□ -1.6
MSH4P40965 OM14YBR230C 405 nt5.03□□□□□ -1.6
MSH4P40965 ARP9YMR033W 1404 nt5.03□□□□□ -1.6
MSH4P40965 PHM7YOL084W 2976 nt5.02□□□□□ -1.61
MSH4P40965 RPL16AYIL133C 600 nt5.02□□□□□ -1.61
MSH4P40965 FMP46YKR049C 402 nt5.02□□□□□ -1.61
MSH4P40965 MRPL20YKR085C 588 nt5.02□□□□□ -1.61
MSH4P40965 YNR021WYNR021W 1215 nt5.02□□□□□ -1.61
MSH4P40965 YPL185WYPL185W 396 nt5.02□□□□□ -1.61
MSH4P40965 VID24YBR105C 1089 nt5.02□□□□□ -1.61
MSH4P40965 SEC66YBR171W 621 nt5.02□□□□□ -1.61
MSH4P40965 PBN1YCL052C 1251 nt5.02□□□□□ -1.61
MSH4P40965 ORC4YPR162C 1590 nt5.02□□□□□ -1.61
MSH4P40965 AVT5YBL089W 1380 nt5.02□□□□□ -1.61
MSH4P40965 DSS1YMR287C 2910 nt5.01□□□□□ -1.61
MSH4P40965 SUC2YIL162W 1599 nt5.01□□□□□ -1.61
MSH4P40965 TMA17YDL110C 453 nt5.01□□□□□ -1.61
MSH4P40965 SOP4YJL192C 705 nt5.01□□□□□ -1.61
MSH4P40965 YJR037WYJR037W 384 nt5.01□□□□□ -1.61
MSH4P40965 ISA1YLL027W 753 nt5.01□□□□□ -1.61
MSH4P40965 MED11YMR112C 396 nt5.01□□□□□ -1.61
MSH4P40965 GPX2YBR244W 489 nt5.01□□□□□ -1.61
MSH4P40965 GCR1YPL075W 2358 nt5.01□□□□□ -1.61
MSH4P40965 RAD1YPL022W 3303 nt5□□□□□ -1.61
MSH4P40965 YER158CYER158C 1722 nt5□□□□□ -1.61
MSH4P40965 TEL1YBL088C 8364 nt5□□□□□ -1.61
MSH4P40965 snR5snR5 204 nt5□□□□□ -1.61
MSH4P40965 DPB4YDR121W 591 nt5□□□□□ -1.61
MSH4P40965 YIL156W-AYIL156W-A 402 nt5□□□□□ -1.61
MSH4P40965 ACF4YJR083C 930 nt5□□□□□ -1.61
MSH4P40965 FBP1YLR377C 1047 nt5□□□□□ -1.61
MSH4P40965 YPL088WYPL088W 1029 nt5□□□□□ -1.61
MSH4P40965 YCL022CYCL022C 516 nt5□□□□□ -1.61
MSH4P40965 EXO70YJL085W 1872 nt5□□□□□ -1.61
MSH4P40965 NUG1YER006W 1563 nt4.99□□□□□ -1.61
MSH4P40965 GIP4YAL031C 2283 nt4.99□□□□□ -1.61
MSH4P40965 PHR1YOR386W 1698 nt4.99□□□□□ -1.61
MSH4P40965 YMR221CYMR221C 1515 nt4.99□□□□□ -1.61
MSH4P40965 ALR2YFL050C 2577 nt4.99□□□□□ -1.61
MSH4P40965 CWC2YDL209C 1020 nt4.99□□□□□ -1.61
MSH4P40965 YDR269CYDR269C 324 nt4.99□□□□□ -1.61
MSH4P40965 YDR355CYDR355C 303 nt4.99□□□□□ -1.61
MSH4P40965 IZH1YDR492W 951 nt4.99□□□□□ -1.61
MSH4P40965 RIP1YEL024W 648 nt4.99□□□□□ -1.61
MSH4P40965 RTT102YGR275W 474 nt4.99□□□□□ -1.61
MSH4P40965 TPM2YIL138C 486 nt4.99□□□□□ -1.61
MSH4P40965 RPL17AYKL180W 555 nt4.99□□□□□ -1.61
MSH4P40965 YLR171WYLR171W 390 nt4.99□□□□□ -1.61
MSH4P40965 MRPL51YPR100W 423 nt4.99□□□□□ -1.61
MSH4P40965 CUR1YPR158W 759 nt4.99□□□□□ -1.61
MSH4P40965 ADF1YCL058W-A 342 nt4.99□□□□□ -1.61
MSH4P40965 SIP1YDR422C 2448 nt4.99□□□□□ -1.61
MSH4P40965 YKL075CYKL075C 1353 nt4.99□□□□□ -1.61
MSH4P40965 TPD3YAL016W 1908 nt4.98□□□□□ -1.61
MSH4P40965 YCR064CYCR064C 411 nt4.98□□□□□ -1.61
MSH4P40965 PUG1YER185W 912 nt4.98□□□□□ -1.61
MSH4P40965 OAR1YKL055C 837 nt4.98□□□□□ -1.61
MSH4P40965 RPS1AYLR441C 768 nt4.98□□□□□ -1.61
MSH4P40965 YOR248WYOR248W 303 nt4.98□□□□□ -1.61
MSH4P40965 RPL19AYBR084C-A 570 nt4.98□□□□□ -1.61
MSH4P40965 YER077CYER077C 2067 nt4.98□□□□□ -1.61
MSH4P40965 IMD2YHR216W 1572 nt4.97□□□□□ -1.61
MSH4P40965 ATG31YDR022C 591 nt4.97□□□□□ -1.61
MSH4P40965 MET32YDR253C 576 nt4.97□□□□□ -1.61
MSH4P40965 YDR491CYDR491C 492 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)CtK(CUU)C 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)D1tK(CUU)D1 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)D2tK(CUU)D2 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)E1tK(CUU)E1 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)E2tK(CUU)E2 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)FtK(CUU)F 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)G1tK(CUU)G1 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)G2tK(CUU)G2 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)G3tK(CUU)G3 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)ItK(CUU)I 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)JtK(CUU)J 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)KtK(CUU)K 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)MtK(CUU)M 73 nt4.97□□□□□ -1.61
MSH4P40965 tK(CUU)PtK(CUU)P 73 nt4.97□□□□□ -1.61
MSH4P40965 HUR1YGL168W 333 nt4.97□□□□□ -1.61
MSH4P40965 COX13YGL191W 390 nt4.97□□□□□ -1.61
MSH4P40965 NGL1YOL042W 1092 nt4.97□□□□□ -1.61
MSH4P40965 GCY1YOR120W 939 nt4.97□□□□□ -1.61
MSH4P40965 PDR5YOR153W 4536 nt4.97□□□□□ -1.61
MSH4P40965 TOG1YER184C 2385 nt4.97□□□□□ -1.61
MSH4P40965 YBL005W-AYBL005W-A 1323 nt4.97□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 83.4 ms